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ERROR install PETSc.jl #189

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weapon-dog opened this issue Sep 7, 2024 · 3 comments
Closed

ERROR install PETSc.jl #189

weapon-dog opened this issue Sep 7, 2024 · 3 comments

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@weapon-dog
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My version of Julia is the latest, and after experiments on both Windows and Ubuntu 22.04 systems, I found that when I used add PETSc to install PETSc.jl, the following error occurred:
Info Given PETSc was explicitly requested, output will be shown live
WARNING: Method definition (::Type{PETSc.DMBoundaryType})(Integer) in module PETSc at Enums.jl:210 overwritten on the same line (check for duplicate calls to include).
ERROR: Method overwriting is not permitted during Module precompilation. Use __precompile__(false) to opt-out of precompilation.
? PETSc
1 dependency successfully precompiled in 3 seconds. 19 already precompiled.
1 dependency failed but may be precompilable after restarting julia
1 dependency had output during precompilation:
┌ PETSc
│ [Output was shown above]

[ Info: Precompiling PETSc [ace2c81b-2b5f-4b1e-a30d-d662738edfe0]
WARNING: Method definition (::Type{PETSc.DMBoundaryType})(Integer) in module PETSc at Enums.jl:210 overwritten on the same line (check for duplicate calls to include).
ERROR: Method overwriting is not permitted during Module precompilation. Use __precompile__(false) to opt-out of precompilation.
[ Info: Skipping precompilation since precompile(false). Importing PETSc [ace2c81b-2b5f-4b1e-a30d-d662738edfe0].
┌ Warning: Replacing docs for PETSc.update! :: Tuple{PETSc.DMGlobalVec, Ptr{Nothing}, PETSc.InsertMode} in module PETSc
└ @ Base.Docs docs\Docs.jl:243
┌ Warning: Replacing docs for PETSc.DMStagVecGetArray :: Union{} in module PETSc
└ @ Base.Docs docs\Docs.jl:243
┌ Warning: Replacing docs for PETSc.DMStagVecSetValuesStencil :: Union{} in module PETSc
└ @ Base.Docs docs\Docs.jl:243
┌ Warning: Replacing docs for PETSc.DMStagVecGetValuesStencil :: Union{} in module PETSc
└ @ Base.Docs docs\Docs.jl:243
┌ Warning: Replacing docs for PETSc.DMStagMatGetValuesStencil :: Union{} in module PETSc
└ @ Base.Docs docs\Docs.jl:243
┌ Warning: Replacing docs for PETSc.DMStagMatSetValuesStencil :: Union{} in module PETSc
└ @ Base.Docs docs\Docs.jl:243
ERROR: LoadError: ccall method definition: argument 1 type doesn't correspond to a C type
Stacktrace:
[1] top-level scope
@ D:\Julia\packages\PETSc\LSdRz\src\ksp.jl:199
[2] eval(m::Module, e::Any)
@ Core .\boot.jl:385
[3] macro expansion
@ D:\Julia\packages\PETSc\LSdRz\src\lib.jl:120 [inlined]
[4] top-level scope
@ D:\Julia\packages\PETSc\LSdRz\src\ksp.jl:108
[5] include(mod::Module, _path::String)
@ Base .\Base.jl:495
[6] include(x::String)
@ PETSc D:\Julia\packages\PETSc\LSdRz\src\PETSc.jl:1
[7] top-level scope
@ D:\Julia\packages\PETSc\LSdRz\src\PETSc.jl:34
[8] include(mod::Module, _path::String)
@ Base .\Base.jl:495
[9] _require(pkg::Base.PkgId, env::String)
@ Base .\loading.jl:2014
[10] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base .\loading.jl:1812
[11] #invoke_in_world#3
@ .\essentials.jl:926 [inlined]
[12] invoke_in_world
@ .\essentials.jl:923 [inlined]
[13] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base .\loading.jl:1803
[14] macro expansion
@ .\loading.jl:1790 [inlined]
[15] macro expansion
@ .\lock.jl:267 [inlined]
[16] __require(into::Module, mod::Symbol)
@ Base .\loading.jl:1753
[17] #invoke_in_world#3
@ .\essentials.jl:926 [inlined]
[18] invoke_in_world
@ .\essentials.jl:923 [inlined]
[19] require(into::Module, mod::Symbol)
@ Base .\loading.jl:1746
in expression starting at D:\Julia\packages\PETSc\LSdRz\src\ksp.jl:71
in expression starting at D:\Julia\packages\PETSc\LSdRz\src\PETSc.jl:1

@boriskaus
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boriskaus commented Sep 7, 2024

PETSc.jl is currently broken - you are every welcome to help fix it.

@ViralBShah
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I'm getting the same error as well.

@ViralBShah
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Dup of #188

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