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pyproject.toml
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# see documentation, e.g.
# - https://packaging.python.org/en/latest/specifications/declaring-project-metadata/#declaring-project-metadata
# - https://setuptools.pypa.io/en/latest/userguide/pyproject_config.html
# - https://www.python.org/dev/peps/pep-0621/
[build-system]
requires = ["setuptools>=64.0.0", "setuptools-scm", "wheel"]
build-backend = "setuptools.build_meta"
[project]
authors = [
{ name = "Meiert W. Grootes", email = "[email protected]" }
]
classifiers = [
"Development Status :: 2 - Pre-Alpha",
"Intended Audience :: Developers",
"Intended Audience :: Science/Research",
"",
"Natural Language :: English",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
]
dependencies = []
description = "ABM modelling framework using networks and tensor algebra supported by the DGL library"
keywords = ["ABM"," Tensor"," PyTorch"]
license = {file = "LICENSE"}
name = "dgl_abm"
readme = {file = "README.md", content-type = "text/markdown"}
requires-python = ">=3.8"
version = "0.1.0"
[project.optional-dependencies]
dev = [
"build", # build is not only used in publishing (below), but also in the template's test suite
"bump-my-version",
"coverage [toml]",
"pytest",
"pytest-cov",
"ruff",
"sphinx",
"sphinx_rtd_theme",
"sphinx-autoapi",
"tox",
"myst_parser",
]
docs = [
"sphinx",
"sphinx_rtd_theme",
"sphinx-autoapi",
"myst_parser",
]
publishing = [
"build",
"twine",
"wheel",
]
[project.urls]
Repository = "https://github.com/SDCCA/dgl_abm"
Issues = "https://github.com/SDCCA/dgl_abm/issues"
Changelog = "https://github.com/SDCCA/dgl_abm/CHANGELOG.md"
ReadTheDocs = "https://dgl_abm.readthedocs.io"
[tool.pytest.ini_options]
testpaths = ["tests"]
[tool.coverage.run]
branch = true
source = ["src/dgl_abm"]
command_line = "-m pytest"
[tool.tox]
legacy_tox_ini = """
[tox]
envlist = py38,py39,py310,py311,py312
skip_missing_interpreters = true
[testenv]
commands = pytest
extras = dev
"""
[tool.ruff]
line-length = 120
output-format = "concise"
extend-exclude = ["docs"]
[tool.ruff.lint]
# Allow unused variables when underscore-prefixed.
dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$"
# Enable Pyflakes `E` and `F` codes by default.
select = ["ALL"]
ignore = [
"ANN101", # Missing type annotation for `self` in method
"ANN102", # Missing type annotation for `cls` in classmethod
"ANN204", # Missing return type annotation for special (dunder) method
"FBT", # Using boolean function arguments
"TD", # TODOs
"FIX001", # Resolve FIXMEs
"FIX002", # Resolve TODOs
"B028", # No explicit `stacklevel` keyword argument found in warning
# No docstrings required in the following cases
"D100", # Missing module docstring
"D104", # Missing public package docstring
"D105", # Missing docstring in magic method
"D107", # Missing docstring in `__init__`
]
pydocstyle.convention = "google"
[tool.ruff.lint.per-file-ignores]
# Tests can ignore a few extra rules
"tests/**.py" = [
"ANN201", # Missing return type annotation for public function
"PT011", # Missing `match` parameter in `pytest.raises()`
"S101", # Use of assert is detected
]
[tool.ruff.lint.isort]
known-first-party = ["dgl_abm"]
force-single-line = true
no-lines-before = ["future","standard-library","third-party","first-party","local-folder"]
[tool.bumpversion]
current_version = "0.1.0"
[[tool.bumpversion.files]]
filename = "src/dgl_abm/__init__.py"
[[tool.bumpversion.files]]
filename = "pyproject.toml"
[[tool.bumpversion.files]]
filename = "CITATION.cff"
[[tool.bumpversion.files]]
filename = "docs/conf.py"