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import_pipeline.md

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Import the pipeline

If you navigate to the pipelines page (this can be found in the navigation bar on the left-hand-side) and then can see the pipeline under MY PIPELINES & TOOLS continue to step 2

Otherwise, you will need to import it.

To import the pipeline you need to:

  • Go to the pipelines page
  • Click the green New button (top right)
  • Select the GitHub icon to import the Nextflow pipeline from GitHub
  • Paste the URL of our pipeline https://github.com/lifebit-ai/splicing-pipelines-nf
  • Name the pipeline, eg splicing-pipeline
  • (Optional:) enter a pipeline description
  • Click Next & Create pipeline 🎉

import_splicing_pip