We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
No description provided.
The text was updated successfully, but these errors were encountered:
参考:https://github.com/LucaOne/LucaOneTasks/blob/master/src/training/lucaone/run_ProtLoc_lucaone_linear.sh 这里只使用一个通路(这个任务只使用lucaone的embedding通路,因为目标是为了对比embedding的效果,你可以将这个脚本的INPUT_TYPE="seq_matrix"便是两通路,也就是增加原始序列的通路,其他参数按需修改,比如序列最大允许长度SEQ_MAX_LENGTH与matrix_max_length,用于最终checkpoint选择的BEST_METRIC_TYPE,以及训练learning rate与batch size等)。 你的任务数据集csv的格式参考这个任务,这个任务是6分类,csv里面最后一个字段是label index,label index与label name的映射在label.txt中。 建议使用LucaOne的embedding,我们使用了很多任务进行测试,LucaOne的embedding在很多任务上都超过esm的embedding。
Sorry, something went wrong.
No branches or pull requests
No description provided.
The text was updated successfully, but these errors were encountered: