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add citation CFF and information about authorship
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tavareshugo committed Aug 23, 2024
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35 changes: 35 additions & 0 deletions CITATION.cff
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# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!

# Note: we use the author alias to record author contributions
# This is a known limitation of CFF files: https://github.com/citation-file-format/citation-file-format/issues/112

cff-version: 1.2.0
title: Course Development Guidelines
message: >-
You may cite these materials using the metadata in this
file. Please cite our materials if you publish materials
derived from these, run a workshop using them, or use
the information in your own work.
type: dataset
authors:
- given-names: Hugo
family-names: Tavares
affiliation: Cambridge Centre for Research Informatics Training
orcid: 'https://orcid.org/0000-0001-9373-2726'
alias: 'writing - original draft; conceptualisation; software'
- given-names: Martin
family-names: van Rongen
affiliation: Cambridge Centre for Research Informatics Training
orcid: 'https://orcid.org/0000-0002-1441-367X'
alias: 'writing - review & editing; conceptualisation; software'
- given-names: Alexia
family-names: Cardona
affiliation: Cambridge Centre for Research Informatics Training
orcid: 'https://orcid.org/0000-0002-7877-5565'
alias: 'conceptualisation'
repository-code: 'https://github.com/cambiotraining/quarto-course-template'
url: 'https://cambiotraining.github.io/quarto-course-template/'
license: CC-BY-4.0
commit: 3c8234e82c7315cfb4d869d9635433bf62baf17f
date-released: '2024-08-23'
50 changes: 7 additions & 43 deletions index.md
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Expand Up @@ -41,55 +41,19 @@ Exercises in these materials are labelled according to their level of difficulty
| {{< fa solid star >}} {{< fa solid star >}} {{< fa solid star >}} | Exercises in level 3 require going beyond the concepts and syntax introduced to solve new problems. |


## Authors
<!--
The listing below shows an example of how you can give more details about yourself.
These examples include icons with links to GitHub and Orcid.
-->

About the authors:

- **Alexia Cardona**
<a href="https://orcid.org/0000-0002-7877-5565" target="_blank"><i class="fa-brands fa-orcid" style="color:#a6ce39"></i></a>
<a href="https://github.com/ac812" target="_blank"><i class="fa-brands fa-github" style="color:#4078c0"></i></a>
_Affiliation_: Bioinformatics Training Facility, University of Cambridge
_Roles_: conceptualisation
- **Hugo Tavares**
<a href="https://orcid.org/0000-0001-9373-2726" target="_blank"><i class="fa-brands fa-orcid" style="color:#a6ce39"></i></a>
<a href="https://github.com/tavareshugo" target="_blank"><i class="fa-brands fa-github" style="color:#4078c0"></i></a>
_Affiliation_: Bioinformatics Training Facility, University of Cambridge
_Roles_: writing - original draft; conceptualisation; coding
- **Martin van Rongen**
<a href="https://github.com/mvanrongen" target="_blank"><i class="fa-brands fa-github" style="color:#4078c0"></i></a>
_Affiliation_: Bioinformatics Training Facility, University of Cambridge
_Roles_: writing - review & editing; conceptualisation; coding


## Citation

<!-- We can do this at the end -->
## Citation & Authors

Please cite these materials if:

- You adapted or used any of them in your own teaching.
- These materials were useful for your research work. For example, you can cite us in the methods section of your paper: "We carried our analyses based on the recommendations in _TODO_.".

You can cite these materials as:

> TODO
- These materials were useful for your research work. For example, you can cite us in the methods section of your paper: "We carried our analyses based on the recommendations in _YourReferenceHere_".

Or in BibTeX format:
<!--
This is generated automatically from the CITATION.cff file.
If you think you should be added as an author, please get in touch with us.
-->

```
@Misc{,
author = {},
title = {},
month = {},
year = {},
url = {},
doi = {}
}
```
{{< citation CITATION.cff >}}


## Acknowledgements
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28 changes: 28 additions & 0 deletions materials/03-authorship.md
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---
title: Authorship
---

## Being an author

We welcome contributions to our course materials.
If your contributions become substantial, you may be added as an author.
We currently have no hard rule about what constitues sufficient work for an authorship.
If you think you should be an author on one of our courses, please get in touch.

We also acknowledge smaller contributions under the Acknowledgements section of the course front page.


## Citation

We use the [Citation File Format (CFF)](https://citation-file-format.github.io/) to keep information about authorship in our materials.
Although this format is primarily designed for software and data, we adopted it [following The Carpentries](https://carpentries.org/blog/2024/07/lesson-cffs/) training community.

Each repository has a `CITATION.cff` file, which is used to automatically populate the course front page with citation format and author information.


## Author roles

Unfortunately, at the present the CFF format schema does not allow adding an author "role" ([see here](https://github.com/citation-file-format/citation-file-format/issues/112)).
As a workaround, we use the author `alias` entry to record this information.

We don't have a formal ontology for author roles, although we take inspiration from [CRT](https://credit.niso.org/contributor-roles-defined/) and [DataCite](https://datacite-metadata-schema.readthedocs.io/en/4.5/appendices/appendix-1/contributorType/).
3 changes: 2 additions & 1 deletion materials/_chapters.yml
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Expand Up @@ -3,4 +3,5 @@ book:
- part: "Developer Guidelines"
chapters:
- materials/01-render_guidelines.md
- materials/02-content_guidelines.md
- materials/02-content_guidelines.md
- materials/03-authorship.md

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