notes

Author: pieper

README.md

@@ -14,8 +14,11 @@ Conversion ideas:
 * Convert all masks to DICOM SEG linked to corresponding series
 * Load full collection into dedicated Google DICOM store for viewing in OHIF or Slicer
 * Use dcmqi to do the nifti to dicom conversion
+* Re-export the CTs with better window/level settings and experiment with compression
+* Create MRB files preloaded with segmentations
 
 Open issues:
 * What colors should we use so the seg outlines are easily visible
 * What naming conventions should we use in the SEG (picking the right dicom terminology)
 * What anatomy labels should we use and can we determine them automatically, or do we need to manually assign them
+* Are there smoothness or other geometric constratints we can apply to clean up the segmentations