Module-1_bash-jupyter-git/git_reset_local_repo.ipynb

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    "git commit -a -m \"commit local changes\"\n",
    "\n",
    "git stash apply\n",
    "\n",
    "git commit -a -m 'commit stashed changes'\n",
    "\n",
    "git stash clear\n",
    "\n",
    "### at this point, students should have their homeworks restored, and they should confirm this before proceeding\n",
    "\n",
    "mkdir ~/Applied-Bioinformatics-Homeworks\n",
    "\n",
    "cp Module-1_bash-jupyter-git/*.ipynb ~/Applied-Bioinformatics-Homeworks\n",
    "\n",
    "### confirm all ipynb files were successfully copied to ~/Applied-Bioinformatics-Homeworks\n",
    "\n",
    "git reset --hard origin/master\n",
    "\n",
    "git pull\n",
    "\n",
    "### now go create new github repo for homeworks, eg https://github.com/<username>/Applied-Bioinformatics_Homeworks\n",
    "### then commit local files to that github repo\n",
    "\n",
    "cd ~/Applied-Bioinformatics-Homeworks\n",
    "\n",
    "git init\n",
    "\n",
    "git add .\n",
    "\n",
    "git commit -m 'First commit'\n",
    "\n",
    "git remote add origin https://github.com/<username>/Applied-Bioinformatics_Homeworks.git\n",
    "    \n",
    "git push origin master"
   ]
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