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_quarto.yml
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project:
type: website
output-dir: docs
editor:
markdown:
wrap: sentence
execute:
freeze: auto
website:
title: "Bayesian Regression: Theory & Practice"
repo-url: https://github.com/michael-franke/Bayesian-Regression
repo-actions: [edit, issue]
sidebar:
style: "docked"
search: true
collapse-level: 1
contents:
- href: index.qmd
text: Overview
- section: "00: Background"
contents:
- href: 00-background.qmd
text: Overview
- href: practice-sheets/00a-examples-WebPPL.qmd
text: Thinking Bayesian
- href: practice-sheets/00b-wrangling-plotting.qmd
text: Wrangling & plotting
- section: "01: Regression basics"
contents:
- href: 01-basics.qmd
text: Overview
- href: practice-sheets/01a-regression-WebPPL.qmd
text: "Simple regr. in WebPPL"
- href: practice-sheets/01b-regression-BRMS.qmd
text: "Simple regr. in BRMS"
- href: practice-sheets/01c-priors.qmd
text: "Priors & predicitives"
- section: "02: Categorical predictors"
contents:
- href: 02-categorical-predictors.qmd
text: Overview
- href: practice-sheets/02a-contrast-coding-tutorial.qmd
text: Categorical predictors
- href: practice-sheets/02b-catPreds-exercises.qmd
text: "Exercises: Bayesian LMs"
- section: "03: Multi-level models"
contents:
- href: 03-hierarchical-models.qmd
text: Overview
- href: practice-sheets/03a-hierarchical-models-tutorial.qmd
text: Hierarchical models (tutorial)
- href: practice-sheets/03b-hierarchical-models-exercises.qmd
text: Hierarchical models (exercises)
- href: practice-sheets/03c-multi-membership.qmd
text: Multi-membership
- href: practice-sheets/03d-MLM-pooling.qmd
text: MLMs & pooling
- section: "04: GLMs & beyond"
contents:
- href: 04-GLM.qmd
text: Overview
- href: practice-sheets/04a-GLM-tutorial.qmd
text: GLM (tutorial)
- href: practice-sheets/04b-GLM-exercises.qmd
text: GLM (exercises)
- href: practice-sheets/04c-GLM-predictives.qmd
text: Predictions from GLMs
- href: practice-sheets/04d-distributional-models.qmd
text: Distributional models
- href: practice-sheets/04e-mixture-models.qmd
text: Mixture models
- section: "05: MCMC sampling"
contents:
- href: 05-MCMC.qmd
text: Overview
- href: practice-sheets/05a-MCMC-diagnostics.qmd
text: MCMC diagnostics
- href: practice-sheets/05b-divergences.qmd
text: Divergent transitions
- section: "06: Model comparison"
contents:
- href: 06-model-comparison.qmd
text: Overview
- href: practice-sheets/06a-model-comparison.qmd
text: Model comparison
- section: "07: Model criticism"
contents:
- href: practice-sheets/07a-model-criticism.qmd
text: Model criticism
- section: "08: Hypothesis testing"
contents:
- href: practice-sheets/08-hypothesis-testing.qmd
text: Hypothesis testing
- section: "09: Causal inference"
contents:
- href: 09-causal-inference.qmd
text: Overview
- href: practice-sheets/09a-stochastic-dependence.qmd
text: Stochastic dependence
- href: practice-sheets/09b-causal-inference.qmd
text: Causal inference
- section: "10: Non-linear models"
contents:
- href: practice-sheets/10a-nonLinear.qmd
text: Custom non-linearity
- href: practice-sheets/10b-GAMs.qmd
text: Generalized additive models
- href: practice-sheets/10c-Gaussian-processes.qmd
text: Gaussian processes regression
- section: "11: Practical stuff"
contents:
- href: practice-sheets/11a-cheat-sheet.qmd
text: BRMS cheat sheet
format:
html:
theme: cosmo
css: styles.css
toc: true
code-fold: show
code-summary: "Toggle code"