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1 parent f033280 commit 113ee73Copy full SHA for 113ee73
scirpy/io/_io.py
@@ -263,13 +263,13 @@ def read_10x_vdj(
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filtered
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Only keep filtered contig annotations (i.e. `is_cell` and `high_confidence`).
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If using `filtered_contig_annotations.csv` already, this option
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+ is futile.
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include_fields
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The fields to include in `adata`. The AIRR rearrangment schema contains
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can contain a lot of columns, most of which irrelevant for most analyses.
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Per default, this includes a subset of columns relevant for a typical
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scirpy analysis, to keep `adata.obs` a bit cleaner. Defaults to {include_fields}.
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Set this to `None` to include all columns.
- is futile.
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Returns
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