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ValueError when sorting data in the Variable Explorer #22275

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Pavun-KumarCH opened this issue Jul 21, 2024 · 5 comments
Open

ValueError when sorting data in the Variable Explorer #22275

Pavun-KumarCH opened this issue Jul 21, 2024 · 5 comments

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@Pavun-KumarCH
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Description

What steps will reproduce the problem?

glove_dir = '/Artifical Intelligence/RNN/Datasets_RNN/glove.6B'
embedding_index = {}
f = open(os.path.join(glove_dir, 'glove.6B.100d.txt'), encoding = 'utf8')
for line in f:
values = line.split()
word = values[0]
coefs = np.asarray(values[1:], dtype = 'float32')
embedding_index[word] = coefs
f.close()

Traceback

Traceback (most recent call last):
  File "/Users/pavankumar/anaconda3/lib/python3.11/site-packages/spyder/plugins/variableexplorer/widgets/collectionsdelegate.py", line 171, in createEditor
    editor.setup(value, key, icon=self.parent().windowIcon(),
  File "/Users/pavankumar/anaconda3/lib/python3.11/site-packages/spyder/widgets/collectionseditor.py", line 1486, in setup
    self.widget = CollectionsEditorWidget(self, self.data_copy,
                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/Users/pavankumar/anaconda3/lib/python3.11/site-packages/spyder/widgets/collectionseditor.py", line 1418, in __init__
    self.editor = CollectionsEditorTableView(self, data, readonly,
                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/Users/pavankumar/anaconda3/lib/python3.11/site-packages/spyder/widgets/collectionseditor.py", line 1288, in __init__
    self.source_model = CollectionsModelClass(
                        ^^^^^^^^^^^^^^^^^^^^^^
  File "/Users/pavankumar/anaconda3/lib/python3.11/site-packages/spyder/widgets/collectionseditor.py", line 156, in __init__
    self.set_data(data)
  File "/Users/pavankumar/anaconda3/lib/python3.11/site-packages/spyder/widgets/collectionseditor.py", line 186, in set_data
    self.keys = sorted(list(data.keys()), key=natsort)
                ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/Users/pavankumar/anaconda3/lib/python3.11/site-packages/spyder/widgets/collectionseditor.py", line 85, in natsort
    x = [int(t) if t.isdigit() else t.lower() for t in re.split('([0-9]+)', s)]
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/Users/pavankumar/anaconda3/lib/python3.11/site-packages/spyder/widgets/collectionseditor.py", line 85, in <listcomp>
    x = [int(t) if t.isdigit() else t.lower() for t in re.split('([0-9]+)', s)]
         ^^^^^^
ValueError: invalid literal for int() with base 10: '₂'

Versions

  • Spyder version: 5.4.3 (conda)
  • Python version: 3.11.5 64-bit
  • Qt version: 5.15.2
  • PyQt5 version: 5.15.10
  • Operating System: Darwin 23.5.0

Dependencies

# Mandatory:
applaunchservices >=0.3.0                        :  0.3.0 (OK)
atomicwrites >=1.2.0                             :  1.4.0 (OK)
chardet >=2.0.0                                  :  4.0.0 (OK)
cloudpickle >=0.5.0                              :  2.2.1 (OK)
cookiecutter >=1.6.0                             :  2.5.0 (OK)
diff_match_patch >=20181111                      :  20200713 (OK)
intervaltree >=3.0.2                             :  3.1.0 (OK)
IPython >=7.31.1,<9.0.0,!=8.8.0,!=8.9.0,!=8.10.0 :  8.20.0 (OK)
jedi >=0.17.2,<0.19.0                            :  0.18.1 (OK)
jellyfish >=0.7                                  :  1.0.1 (OK)
jsonschema >=3.2.0                               :  4.19.2 (OK)
keyring >=17.0.0                                 :  23.13.1 (OK)
nbconvert >=4.0                                  :  7.10.0 (OK)
numpydoc >=0.6.0                                 :  1.5.0 (OK)
parso >=0.7.0,<0.9.0                             :  0.8.3 (OK)
pexpect >=4.4.0                                  :  4.8.0 (OK)
pickleshare >=0.4                                :  0.7.5 (OK)
psutil >=5.3                                     :  5.9.0 (OK)
pygments >=2.0                                   :  2.15.1 (OK)
pylint >=2.5.0,<3.0                              :  2.16.2 (OK)
pylint_venv >=2.1.1                              :  2.3.0 (OK)
pyls_spyder >=0.4.0                              :  0.4.0 (OK)
pylsp >=1.7.2,<1.8.0                             :  1.7.2 (OK)
pylsp_black >=1.2.0                              :  1.2.1 (OK)
qdarkstyle >=3.0.2,<3.2.0                        :  3.0.2 (OK)
qstylizer >=0.2.2                                :  0.2.2 (OK)
qtawesome >=1.2.1                                :  1.2.2 (OK)
qtconsole >=5.4.2,<5.5.0                         :  5.4.2 (OK)
qtpy >=2.1.0                                     :  2.4.1 (OK)
rtree >=0.9.7                                    :  1.0.1 (OK)
setuptools >=49.6.0                              :  68.0.0 (OK)
sphinx >=0.6.6                                   :  5.0.2 (OK)
spyder_kernels >=2.4.3,<2.5.0                    :  2.4.4 (OK)
textdistance >=4.2.0                             :  4.2.1 (OK)
three_merge >=0.1.1                              :  0.1.1 (OK)
watchdog >=0.10.3                                :  2.1.6 (OK)
zmq >=22.1.0                                     :  25.1.0 (OK)

# Optional:
cython >=0.21                                    :  3.0.9 (OK)
matplotlib >=3.0.0                               :  3.7.4 (OK)
numpy >=1.7                                      :  1.26.2 (OK)
pandas >=1.1.1                                   :  2.2.2 (OK)
scipy >=0.17.0                                   :  1.11.4 (OK)
sympy >=0.7.3                                    :  1.11.1 (OK)
@dalthviz
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Hi @Pavun-KumarCH thank you for the feedback! Seems like inside your data a 2 is being represented with a '₂' which generates a ValueError over the logic used to parse variables. Did the error appear when trying to see or maybe edit some variable generated by your code? Could it be possible for you to share a self-contained example that could help us reproduce this locally (the code you posted over the OP requires some data in a specific directory structure)?

Any further info to help us better understand this is greatly appreciated. Let us know!

@Pavun-KumarCH
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Pavun-KumarCH commented Jul 24, 2024 via email

@dalthviz
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@ccordoba12 should we close this or maybe is worthy to further investigate/add a way to handle this kind of error?

@ccordoba12
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I think we should catch the error and handle it appropriately, although I'm not sure how.

@ccordoba12 ccordoba12 modified the milestones: v6.1.0, v6.0.1 Jul 26, 2024
@ccordoba12 ccordoba12 changed the title word vectors embedding ValueError when sorting data in the Variable Explorer Jul 26, 2024
@dalthviz
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dalthviz commented Jul 31, 2024

Since still no handling has been implement for this kind of error (variables could end up with data that can trigger an error when trying to construct a graphical representation of them) I'm reopening this. Please don't close it @Pavun-KumarCH

@dalthviz dalthviz reopened this Jul 31, 2024
@ccordoba12 ccordoba12 modified the milestones: v6.0.1, v6.0.2 Sep 6, 2024
@ccordoba12 ccordoba12 modified the milestones: v6.0.2, v6.x.x Sep 26, 2024
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