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Trends In Microscopy 2025 - Interactive Open-source Image Analysis and Scientific Plotting Workshop

Course contents for BiAPoL "Interactive Open-source Image Analysis and Scientific Plotting" Workshop at Trends in Microscopy conference 2025.

The Jupyter book of the course can be viewed under this URL: https://biapol.github.io/TrendsInMicroscopy_2025/

This work is licensed by the Bio-Image Analysis Technology Development group (BiAPoL), Cluster of Excellence Physics of Life (PoL), Dresden, under a Creative Commons Attribution 4.0 International License.

It is maintained using Jupyter lab and build using Jupyter book.

Slides are available in Zenodo: https://zenodo.org/records/15050331

Acknowledgements

We would like to acknowledge all contributors who spend time in the past years to make slides and notebooks we are reusing there, in particular Robert Haase (Scads.AI Leipzig) and Till Korten (Helmholtz AI). This project was supported by the Deutsche Forschungsgemeinschaft under Germany’s Excellence Strategy – EXC2068 - Cluster of Excellence “Physics of Life” of TU Dresden.

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