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@CEGRcode

Center for Eukaryotic Gene Regulation

The CEGR is composed of Cornell laboratories focused on understanding the mechanisms of gene regulation.

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  1. scriptmanager scriptmanager Public

    genomics toolbox that supports both graphical and command-line execution

    Java 14 5

  2. GenoPipe GenoPipe Public

    Toolkit for characterizing the genotype of NGS datasets

    Shell 4 1

  3. stencil stencil Public

    A web templating engine for visualizing and sharing life science datasets

    JavaScript 7 2

  4. yep-trackhub yep-trackhub Public

  5. plotter plotter Public

    Visualization tool to plot composites at reference points & regions of interest

    JavaScript 2

Repositories

Showing 10 of 33 repositories
  • plotter Public

    Visualization tool to plot composites at reference points & regions of interest

    CEGRcode/plotter’s past year of commit activity
    JavaScript 2 0 22 3 Updated Apr 4, 2025
  • scriptmanager-docs Public

    website and documentation for scriptmanager

    CEGRcode/scriptmanager-docs’s past year of commit activity
    JavaScript 0 MIT 0 8 0 Updated Mar 31, 2025
  • 2025-Krebs_Science Public

    BX methods paper

    CEGRcode/2025-Krebs_Science’s past year of commit activity
    Shell 0 MIT 0 0 1 Updated Mar 27, 2025
  • cegrcode.github.io Public

    Pugh Lab Website at Cornell.

    CEGRcode/cegrcode.github.io’s past year of commit activity
    HTML 1 0 0 0 Updated Mar 12, 2025
  • labtutorial Public

    PughLab's Infrastructure and Software setup guides

    CEGRcode/labtutorial’s past year of commit activity
    JavaScript 2 0 0 0 Updated Jan 29, 2025
  • ControlledAtlasPipeline_Fall2024 Public
    CEGRcode/ControlledAtlasPipeline_Fall2024’s past year of commit activity
    Python 0 0 0 0 Updated Dec 20, 2024
  • scriptmanager Public

    genomics toolbox that supports both graphical and command-line execution

    CEGRcode/scriptmanager’s past year of commit activity
    Java 14 MIT 5 47 3 Updated Dec 3, 2024
  • 2023-Krebs_BenzonaseSeq Public

    Analysis for methods and protocol paper

    CEGRcode/2023-Krebs_BenzonaseSeq’s past year of commit activity
    Shell 0 0 0 0 Updated Nov 20, 2024
  • 20XX-LastName_Journal Public template

    The template repo for future publication-associated repositories

    CEGRcode/20XX-LastName_Journal’s past year of commit activity
    Shell 0 0 0 0 Updated Nov 4, 2024
  • stencil Public

    A web templating engine for visualizing and sharing life science datasets

    CEGRcode/stencil’s past year of commit activity
    JavaScript 7 MIT 2 0 11 Updated Oct 29, 2024
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