petab_MS - a Python package for handling PEtab files for multiscale systems

PEtab_MS is an extension of PEtab for multiscale systems. PEtab is a data format for specifying parameter estimation problems in systems biology. This repository provides the petab Python package for reading, writing and validating PEtab files.

Installation

The PEtab library is available on pypi and the easiest way to install it is running

pip3 install petab_MS

It will require Python>=3.7.1 to run.

Development versions of the PEtab library can be installed using

pip3 install https://github.com/EmadAlamoudi/libpetab-python-MS/archive/develop.zip

(replace develop by the branch or commit you would like to install).

Getting help

If you have any question or problems with this package, feel free to post them at our GitHub issue tracker.

Contributing

Contributions and feedback to this package are very welcome, see our contribution guide.