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pXg v2.4.1

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@progistar progistar released this 13 Mar 15:00
· 1 commit to main since this release
v2.4.1-2025-03-13
4042dd3

Updates

  • Added an option to select raw read count or normalized read count (i.e., RPHM, read-per-hundread-million). RPHM is the preferred choice when analyzing multiple BAM files, and it is set as the default.
  • Added an option to print target-only results, which is useful for assigning read counts to confident peptides (e.g., those already verified by database search).
  • Implemented a new function to build a database from FASTA files and pXg results. This functionality is available in "BuildSequenceDB.jar." The potential applications of this database are still being explored.

Full Changelog: v2.4.0-2024-12-10...v2.4.1-2025-03-13

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