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AMPLab at UC Berkeley

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  1. shark shark Public

    Development in Shark has been ended.

    Scala 993 327

  2. SparkNet SparkNet Public

    Distributed Neural Networks for Spark

    Scala 603 172

  3. keystone keystone Public

    Simplifying robust end-to-end machine learning on Apache Spark.

    Scala 470 117

  4. spark-ec2 spark-ec2 Public archive

    Scripts used to setup a Spark cluster on EC2

    Python 393 297

  5. graphx graphx Public

    Former GraphX development repository. GraphX has been merged into Apache Spark; please submit pull requests there.

    Scala 360 103

  6. snap snap Public

    Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data

    C++ 289 66

Repositories

Showing 10 of 47 repositories
  • snap Public

    Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data

    C++ 289 Apache-2.0 66 27 9 Updated Feb 23, 2025
  • succinct Public

    Enabling queries on compressed data.

    Java 279 Apache-2.0 74 5 3 Updated Dec 16, 2023
  • ernest Public

    Code for Ernest

    Python 33 Apache-2.0 19 2 2 Updated Jul 6, 2023
  • graphx Public

    Former GraphX development repository. GraphX has been merged into Apache Spark; please submit pull requests there.

    Scala 360 Apache-2.0 103 18 13 Updated Dec 5, 2022
  • zipg Public

    A Memory-efficient Graph Store for Interactive Queries

    Java 12 5 0 3 Updated Sep 1, 2021
  • smash Public

    Benchmarking toolkit for variant calling

    Python 47 BSD-2-Clause 13 4 1 Updated Oct 13, 2020
  • succinct-cpp Public

    Succinct C++

    C++ 25 60 13 1 Updated Sep 13, 2020
  • iolap Public
    Scala 11 Apache-2.0 8 0 1 Updated Jul 23, 2020
  • SparkNet Public

    Distributed Neural Networks for Spark

    Scala 603 MIT 172 26 4 Updated Jul 23, 2020
  • sprint Public

    Sprint Transformations for RegEx queries

    C++ 9 4 0 0 Updated Oct 1, 2019