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SYNERGxDB is a comprehensive database to explore synergistic drug combinations for biomarker discovery.

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SYNERGxDB Web App

Setup Instructions

  • Fork and clone this repo
git clone [email protected]/{yourUsername}/SYNERGxDB/.git
cd SYNERGxDB
  • Create .env using .env.example as a reference to access the database

  • Install all server dependencies npm i

  • Start the server by running npm start or npm run devstart(development mode) command

  • Install all client dependencies cd client && npm i

  • Start the client (development mode) by running npm start

  • Open http://localhost:3000 to view it in the browser.

Build Instructions

  • Go into clients directory cd client

  • To build React app for production use npm run build command

Dependencies

  • React
  • Styled-Components
  • Styled-Normalize
  • Plotly.js
  • React-Dom
  • React-Router
  • React-plotly.js
  • React-window
  • Express
  • Knex
  • Dotenv
  • Body-parser

Dev Dependenices

  • Nodemon
  • Eslint

Servers

Database

A MySQL dump of pharmacological and molecular profiles of SYNERGxDB is available on Zenodo.

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SYNERGxDB is a comprehensive database to explore synergistic drug combinations for biomarker discovery.

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