Ploidy for Foxtrot VDS [VS-1418] #5018

Job	Run time
build and push gatk docker to artifacts	1s
check if the environment has privileges	1s
Validate generated WDLs using womtools	13m 8s
Validate script WDLs using womtools	50s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	2h 18m 17s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	1h 59m 42s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	3h 19m 53s
WDL test RUN_M2_WDL on cromwell	1h 29m 47s
WDL test RUN_CNN_WDL on cromwell	1h 21m 7s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	1h 42m 0s
Java 17.0.6+10 build and test cloud	18m 9s
Java ${{ matrix.Java }} test on docker ${{ matrix.testType }}	0s
Java 17.0.6+10 build and test integration	30m 22s
Java 17.0.6+10 build and test unit	19m 30s
	13h 32m 47s

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