Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

make MergeVcfs (more) deterministic #2000

Open
wants to merge 2 commits into
base: master
Choose a base branch
from

Conversation

kachulis
Copy link
Contributor

MergeVcfs currently stores input headers in a HashSet, so that the order they are passed to be merged is non-deterministic, which can lead to the resulting merged header being non-deterministic. This PR changes that so that (hopefully) the results of MergeVcf are always the same.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant