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Update of Github CI template #217

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Aug 28, 2024
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21 changes: 11 additions & 10 deletions content/continuous-integration.md
Original file line number Diff line number Diff line change
Expand Up @@ -240,47 +240,48 @@ in the [Collaborative Git lesson](https://coderefinery.github.io/git-collaborati

```{code-block} yaml
---
emphasize-lines: 16,29,39-45
emphasize-lines: 14,30,40-46
---
# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# This workflow will install Python dependencies, run tests and lint with a single version of Python
# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

name: Python package
name: Test

on:
push:
branches: [ "main" ]
pull_request:
branches: [ "main" ]

permissions:
contents: read
pull-requests: write

jobs:
build:
permissions:
contents: read
pull-requests: write

runs-on: ubuntu-latest

steps:
- uses: actions/checkout@v3
- uses: actions/checkout@v4
- name: Set up Python 3.10
uses: actions/setup-python@v3
with:
python-version: "3.10"
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install flake8 pytest pytest-cov
pip install flake8 pytest pytest-cov
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest and calculate coverage
- name: Test with pytest
run: |
pytest --cov-report "xml:coverage.xml" --cov=.
pytest --cov-report "xml:coverage.xml" --cov=.
- name: Create Coverage
if: ${{ github.event_name == 'pull_request' }}
uses: orgoro/coverage@v3
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2 changes: 1 addition & 1 deletion requirements.txt
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
Sphinx
sphinx < 8.0
sphinx_rtd_theme
myst_nb
git+https://github.com/rkdarst/sphinx-copybutton.git@exclude-unselectable-3
Expand Down
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