velocyto logs

Author: craniolab

cellranger_related/cellranger_code/velocyto/job.8682315.err

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+[bam_sort_core] merging from 64 files and 16 in-memory blocks...
+[E::idx_find_and_load] Could not retrieve index file for '/groups/mpistaff/Cranio_Lab/Louk_Seton/4_species_project/cellranger_related/cellranger_output/sc_rnaseq/catshark/sScyCan1.1/SE8_9/outs/cellsorted_possorted_genome_bam.bam'
+[bam_sort_core] merging from 48 files and 16 in-memory blocks...
+[E::idx_find_and_load] Could not retrieve index file for '/groups/mpistaff/Cranio_Lab/Louk_Seton/4_species_project/cellranger_related/cellranger_output/sc_rnaseq/catshark/sScyCan1.1/SE10/outs/cellsorted_possorted_genome_bam.bam'
+[bam_sort_core] merging from 48 files and 16 in-memory blocks...
+[E::idx_find_and_load] Could not retrieve index file for '/groups/mpistaff/Cranio_Lab/Louk_Seton/4_species_project/cellranger_related/cellranger_output/sc_rnaseq/catshark/sScyCan1.1/SE11/outs/cellsorted_possorted_genome_bam.bam'
+[bam_sort_core] merging from 48 files and 16 in-memory blocks...
+[E::idx_find_and_load] Could not retrieve index file for '/groups/mpistaff/Cranio_Lab/Louk_Seton/4_species_project/cellranger_related/cellranger_output/sc_rnaseq/catshark/sScyCan1.1/SE12/outs/cellsorted_possorted_genome_bam.bam'