feat(application): Add support for Kustomize Patches

[stevendborrelli]

Description of your changes

• Adds support for Kustomize Patches
• updates upstream ArgoCD to v2.12.6

Fixes #208

I have:

• Read and followed Crossplane's [contribution process].
• Run make reviewable test to ensure this PR is ready for review. It looks like linting is broken in the Makefile.

How has this code been tested

We've tested this successfully internally, also confirmed by comment #208 (comment).

[stevendborrelli]

I'm a little unsure of the goverter conversions, there are a few fields missing that I have commented out.

[blakepettersson]

@stevendborrelli which fields are you uncertain about? https://github.com/argoproj/argo-cd/blob/d408909df6f950dd4b1a0b898c3b77259aef394f/pkg/apis/application/v1alpha1/types.go#L521

[stevendborrelli]

@blakepettersson There are new fields I was pulling from main that aren't in the last release. I've removed them in commit: 966a5ae.

[stevendborrelli]

@janwillies @MisterMX could we get a review of this?

[janwillies]

Thanks for the PR @stevendborrelli! Changes look good to me, figuring out why the linter fails

[MisterMX]

Looks good to me so far. I don't see any major issues - I haven't tested it by myself, though.

[MisterMX]

Looks already good to me. @stevendborrelli can you fix the one last thing and squash your changes into a single commit using the PR's title?

[stevendborrelli]

@MisterMX I've squashed the commits

[MisterMX]

LGTM. Thank you very much @stevendborrelli!

[MisterMX]

@stevendborrelli can you fix the linter issues?

[stevendborrelli]

@MisterMX Yes, I will take a look.

[stevendborrelli]

I've addressed all linter issues I can find with 1.56.x, updated the GitHub action actions/upload-artifact since v3 was deprecated.

I'd like this PR to get merged as I think the Github runner is unable to run the Linter action.

The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.

If I run the linter locally it runs fine:

$ docker run --rm -v $(pwd):/app -w /app golangci/golangci-lint:v1.56.2 golangci-lint run -v
level=info msg="[config_reader] Config search paths: [./ /app / /root]"
level=info msg="[config_reader] Used config file .golangci.yml"
level=info msg="[lintersdb] Active 43 linters: [asasalint asciicheck bidichk bodyclose contextcheck durationcheck errcheck errchkjson errorlint exhaustive exportloopref gocheckcompilerdirectives gochecksumtype goconst gocritic gocyclo gofmt goimports golint gosec gosimple gosmopolitan govet ineffassign loggercheck makezero misspell musttag nakedret nilerr noctx prealloc protogetter reassign rowserrcheck spancheck sqlclosecheck staticcheck testifylint unconvert unparam unused zerologlint]"
level=info msg="[lintersdb] Active presets: [bugs unused]"
level=info msg="[loader] Go packages loading at mode 575 (compiled_files|exports_file|imports|name|types_sizes|deps|files) took 32.356091014s"
level=warning msg="[runner] The linter 'golint' is deprecated (since v1.41.0) due to: The repository of the linter has been archived by the owner. Replaced by revive."
level=info msg="[runner/filename_unadjuster] Pre-built 0 adjustments in 11.565583ms"
level=info msg="[linters_context/goanalysis] analyzers took 3m27.289949583s with top 10 stages: buildir: 1m14.041348757s, goimports: 1m11.358363532s, buildssa: 18.754367116s, gocritic: 7.997533501s, fact_deprecated: 5.444047237s, inspect: 5.053023385s, exhaustive: 4.455594536s, ctrlflow: 3.67664383s, printf: 3.661249716s, nilness: 2.735253722s"
level=info msg="[runner] Issues before processing: 1019, after processing: 0"
level=info msg="[runner] Processors filtering stat (out/in): path_prettifier: 1019/1019, skip_dirs: 39/39, autogenerated_exclude: 39/39, exclude: 39/39, identifier_marker: 39/39, nolint: 0/16, cgo: 1019/1019, filename_unadjuster: 1019/1019, skip_files: 39/1019, exclude-rules: 16/39"
level=info msg="[runner] processing took 7.229796ms with stages: nolint: 3.266334ms, autogenerated_exclude: 1.389042ms, identifier_marker: 804µs, filename_unadjuster: 589.667µs, cgo: 433.459µs, skip_files: 244.251µs, path_prettifier: 242.583µs, exclude-rules: 209.167µs, skip_dirs: 47.833µs, max_same_issues: 834ns, severity-rules: 458ns, diff: 417ns, uniq_by_line: 375ns, fixer: 375ns, source_code: 208ns, path_prefixer: 167ns, sort_results: 167ns, exclude: 167ns, path_shortener: 125ns, max_from_linter: 125ns, max_per_file_from_linter: 42ns"
level=info msg="[runner] linters took 38.472752891s with stages: goanalysis_metalinter: 38.465446225s"
level=info msg="File cache stats: 78 entries of total size 831.5KiB"
level=info msg="Memory: 698 samples, avg is 1316.4MB, max is 2889.2MB"
level=info msg="Execution took 1m10.845190697s"

$ echo $?
0