#illuminaBackup
copies selected files and folders into destination directory using rsync. tars selected files and folders into lane specific tar files.
A file called excludeBackup in any of the folders excludes the folder + its subfolders from being backed up.
Its a simple filter for rsync with many integration tests ensuring that only the intended files get copied + checksummed.
-
####build status:
(http://travis-ci.org/idot/illuminaBackup)
-
####usage:
>git clone [email protected]:csf-ngs/illuminaBackup.git
>cd illuminaBackup
>sbt
>assembly
>java -jar target/illuminaBackup.jar -r /path/to/run -t /path/to/tar/folder -o /path/to/savedRuns-t no prevents taring
-
####known bugs: the tar file unfortunately begins one level to low. When untaring the user must untar in a newly created folder.
-
####todo: learn sbt release plugin and do a proper release
-
####technology: scala, sbt, rsync, tar, jcommander, slf4j