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Clean up common config #45

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nrepina opened this issue Mar 24, 2023 · 1 comment · Fixed by #71
Closed

Clean up common config #45

nrepina opened this issue Mar 24, 2023 · 1 comment · Fixed by #71
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nrepina commented Mar 24, 2023

ovr_channel --> remove because redundant with organoid segmentation channel
name_ovr --> not needed, make this hard-coded
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nrepina commented Apr 4, 2023

Also add as config parameter measure_morphology

@enricotagliavini enricotagliavini linked a pull request Apr 28, 2023 that will close this issue
Switch to using Fractal get_regionprops_measurements for scMultiplex feature extraction #57
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@enricotagliavini enricotagliavini removed a link to a pull request Apr 28, 2023
Switch to using Fractal get_regionprops_measurements for scMultiplex feature extraction #57
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@nrepina nrepina linked a pull request May 31, 2023 that will close this issue
Clean up config file parameters #71
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Clean up config file parameters fmi-basel/gliberal-scMultipleX
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