Merge pull request #1537 from glotzerlab/release-3.11.0

Release 3.11.0
glotzerlab · Apr 14, 2023 · ee8897a · ee8897a
2 parents 948eb6d + 5725264
commit ee8897a
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Showing 15 changed files with 34 additions and 32 deletions.
diff --git a/.bumpversion.cfg b/.bumpversion.cfg
@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 3.10.0
+current_version = 3.11.0
 commit = False
 tag = False
 parse = ^(?P<major>0|[1-9]\d*)\.(?P<minor>0|[1-9]\d*)\.(?P<patch>0|[1-9]\d*)(?:-(?P<prerelease>(?:0|[1-9]\d*|\d*[a-zA-Z-][0-9a-zA-Z-]*))(?:\.(?P<number>0|[1-9]\d*|\d*[a-zA-Z-][0-9a-zA-Z-]*)))?$

diff --git a/.github/ISSUE_TEMPLATE/bug_report.yml b/.github/ISSUE_TEMPLATE/bug_report.yml
@@ -62,7 +62,7 @@ body:
     attributes:
       label: HOOMD-blue version
       description: What version of HOOMD-blue are you using?
-      placeholder: 3.10.0
+      placeholder: 3.11.0
     validations:
       required: true
   - type: markdown

diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml
@@ -36,7 +36,7 @@ jobs:
 
     steps:
       - name: Checkout
-        uses: actions/checkout@v3.3.0
+        uses: actions/checkout@v3.5.2
         with:
           fetch-depth: 0
           submodules: true

diff --git a/.github/workflows/stale.yml b/.github/workflows/stale.yml
@@ -12,7 +12,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
     - name: Run stale action
-      uses: actions/stale@v7.0.0
+      uses: actions/stale@v8.0.0
       with:
         operations-per-run: 120
         delete-branch: true

diff --git a/.github/workflows/templates/release.yml b/.github/workflows/templates/release.yml
@@ -23,7 +23,7 @@ jobs:
 
     steps:
       - name: Checkout
-        uses: actions/checkout@v3.3.0
+        uses: actions/checkout@v3.5.2
         with:
           fetch-depth: 0
           submodules: true

diff --git a/.github/workflows/templates/test.yml b/.github/workflows/templates/test.yml
@@ -181,7 +181,7 @@ env:
       run: ( shopt -s dotglob nullglob; rm -rf ./* )
       shell: bash
     - name: Checkout
-      uses: actions/checkout@v3.3.0
+      uses: actions/checkout@v3.5.2
       with:
         path: code
         submodules: true
@@ -209,7 +209,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
     - name: Use jetstream2-admin/start
-      uses: glotzerlab/jetstream2-admin/[email protected].1
+      uses: glotzerlab/jetstream2-admin/[email protected].2
       with:
         OS_APPLICATION_CREDENTIAL_ID: ${{ secrets.OS_APPLICATION_CREDENTIAL_ID }}
         OS_APPLICATION_CREDENTIAL_SECRET: ${{ secrets.OS_APPLICATION_CREDENTIAL_SECRET }}

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
@@ -50,7 +50,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
     - name: Use jetstream2-admin/start
-      uses: glotzerlab/jetstream2-admin/[email protected].1
+      uses: glotzerlab/jetstream2-admin/[email protected].2
       with:
         OS_APPLICATION_CREDENTIAL_ID: ${{ secrets.OS_APPLICATION_CREDENTIAL_ID }}
         OS_APPLICATION_CREDENTIAL_SECRET: ${{ secrets.OS_APPLICATION_CREDENTIAL_SECRET }}
@@ -84,7 +84,7 @@ jobs:
       run: ( shopt -s dotglob nullglob; rm -rf ./* )
       shell: bash
     - name: Checkout
-      uses: actions/checkout@v3.3.0
+      uses: actions/checkout@v3.5.2
       with:
         path: code
         submodules: true
@@ -192,7 +192,7 @@ jobs:
       run: ( shopt -s dotglob nullglob; rm -rf ./* )
       shell: bash
     - name: Checkout
-      uses: actions/checkout@v3.3.0
+      uses: actions/checkout@v3.5.2
       with:
         path: code
         submodules: true
@@ -255,7 +255,7 @@ jobs:
       run: ( shopt -s dotglob nullglob; rm -rf ./* )
       shell: bash
     - name: Checkout
-      uses: actions/checkout@v3.3.0
+      uses: actions/checkout@v3.5.2
       with:
         path: code
         submodules: true
@@ -305,7 +305,7 @@ jobs:
       run: ( shopt -s dotglob nullglob; rm -rf ./* )
       shell: bash
     - name: Checkout
-      uses: actions/checkout@v3.3.0
+      uses: actions/checkout@v3.5.2
       with:
         path: code
         submodules: true
@@ -370,7 +370,7 @@ jobs:
       run: ( shopt -s dotglob nullglob; rm -rf ./* )
       shell: bash
     - name: Checkout
-      uses: actions/checkout@v3.3.0
+      uses: actions/checkout@v3.5.2
       with:
         path: code
         submodules: true
@@ -487,7 +487,7 @@ jobs:
       run: ( shopt -s dotglob nullglob; rm -rf ./* )
       shell: bash
     - name: Checkout
-      uses: actions/checkout@v3.3.0
+      uses: actions/checkout@v3.5.2
       with:
         path: code
         submodules: true
@@ -559,7 +559,7 @@ jobs:
       run: ( shopt -s dotglob nullglob; rm -rf ./* )
       shell: bash
     - name: Checkout
-      uses: actions/checkout@v3.3.0
+      uses: actions/checkout@v3.5.2
       with:
         path: code
         submodules: true

diff --git a/.mailmap b/.mailmap
@@ -156,3 +156,5 @@ Raymond Asare <[email protected]> rayasare <[email protected]>
 Marco Klement <[email protected]> Marco Klement, M.Sc <[email protected]>
 Chris Jones <[email protected]> <[email protected]>
 Melody Zhang <[email protected]> Melody Zhang <[email protected]>
+Jen Bradley <[email protected]> Jen Bradley <[email protected]>
+Jen Bradley <[email protected]> janbridley <[email protected]>
diff --git a/BUILDING.rst b/BUILDING.rst
@@ -145,7 +145,7 @@ Clone using Git_::
 
    $ git clone --recursive https://github.com/glotzerlab/hoomd-blue
 
-Release tarballs are also available as `GitHub release`_ assets: `Download hoomd-v3.10.0.tar.gz`_.
+Release tarballs are also available as `GitHub release`_ assets: `Download hoomd-v3.11.0.tar.gz`_.
 
 .. seealso::
 
@@ -158,7 +158,7 @@ Release tarballs are also available as `GitHub release`_ assets: `Download hoomd
     Execute ``git submodule update --init`` to fetch the submodules each time you switch branches
     and the submodules show as modified.
 
-.. _Download hoomd-v3.10.0.tar.gz: https://github.com/glotzerlab/hoomd-blue/releases/download/v3.10.0/hoomd-v3.10.0.tar.gz
+.. _Download hoomd-v3.11.0.tar.gz: https://github.com/glotzerlab/hoomd-blue/releases/download/v3.11.0/hoomd-v3.11.0.tar.gz
 .. _GitHub release: https://github.com/glotzerlab/hoomd-blue/releases
 .. _git book: https://git-scm.com/book
 .. _Git: https://git-scm.com/

diff --git a/CHANGELOG.rst b/CHANGELOG.rst
@@ -7,8 +7,8 @@ Change Log
 v3.x
 ----
 
-v3.11.0 (not yet released)
-^^^^^^^^^^^^^^^^^^^^^^^^^^
+v3.11.0 (2023-04-14)
+^^^^^^^^^^^^^^^^^^^^
 
 Added:
 

diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -14,7 +14,7 @@ add_subdirectory (CMake)
 
 ################################
 ## Version information
-set(HOOMD_VERSION_RAW "3.10.0")
+set(HOOMD_VERSION_RAW "3.11.0")
 string(REGEX MATCH "(.*)\\.(.*)\\.(.*)$" _hoomd_version_match ${HOOMD_VERSION_RAW})
 set(HOOMD_VERSION_MAJOR ${CMAKE_MATCH_1})
 set(HOOMD_VERSION_MINOR ${CMAKE_MATCH_2})

diff --git a/hoomd/hpmc/ComputeSDF.h b/hoomd/hpmc/ComputeSDF.h
@@ -163,11 +163,11 @@ template<class Shape> class ComputeSDF : public Compute
     double m_xmax;                                   //!< Maximum lambda value
     double m_dx;                                     //!< Histogram step size
 
-    bool m_shape_requires_expansion_moves;  //!< If expansion moves are required
-    std::vector<double> m_hist_compression; //!< Raw histogram data
-    std::vector<double> m_sdf_compression;  //!< Computed SDF
-    std::vector<double> m_hist_expansion;   //!< Raw histogram data
-    std::vector<double> m_sdf_expansion;    //!< Computed SDF
+    bool m_shape_requires_expansion_moves;           //!< If expansion moves are required
+    std::vector<double> m_hist_compression;          //!< Raw histogram data
+    std::vector<double> m_sdf_compression;           //!< Computed SDF
+    std::vector<double> m_hist_expansion;            //!< Raw histogram data
+    std::vector<double> m_sdf_expansion;             //!< Computed SDF
 
     //! Find the maximum particle separation beyond which all interactions are zero
     Scalar getMaxInteractionDiameter();
@@ -591,7 +591,7 @@ template<class Shape> void ComputeSDF<Shape>::countHistogramLinearSearch(uint64_
                                     {
                                     hist_weight_ptl_i_compression = 1.0; // = 1-e^(-\infty)
                                     min_bin_compression = bin_to_sample;
-                                    } // end if (hard_overlap)
+                                    }                                    // end if (hard_overlap)
 
                                 // if no hard overlap, check for a soft overlap if we have
                                 // patches
@@ -644,7 +644,7 @@ template<class Shape> void ComputeSDF<Shape>::countHistogramLinearSearch(uint64_
                                     {
                                     hist_weight_ptl_i_expansion = 1.0; // = 1-e^(-\infty)
                                     min_bin_expansion = bin_to_sample;
-                                    } // end if (hard_overlap)
+                                    }                                  // end if (hard_overlap)
 
                                 // if no hard overlap, check for a soft overlap if necessary
                                 if (!hard_overlap && m_mc->getPatchEnergy())

diff --git a/hoomd/hpmc/external/user.py b/hoomd/hpmc/external/user.py
@@ -67,9 +67,9 @@ class CPPExternalPotential(ExternalField):
         Your code *must* return a value.
 
     .. _VectorMath.h: https://github.com/glotzerlab/hoomd-blue/blob/\
-            v3.10.0/hoomd/VectorMath.h
+            v3.11.0/hoomd/VectorMath.h
     .. _BoxDim.h: https://github.com/glotzerlab/hoomd-blue/blob/\
-            v3.10.0/hoomd/BoxDim.h
+            v3.11.0/hoomd/BoxDim.h
 
     Example:
         .. code-block:: python

diff --git a/hoomd/hpmc/pair/user.py b/hoomd/hpmc/pair/user.py
@@ -75,7 +75,7 @@ class CPPPotentialBase(AutotunedObject):
                 HOOMD-blue source code.
 
     .. _VectorMath.h: https://github.com/glotzerlab/hoomd-blue/blob/\
-            v3.10.0/hoomd/VectorMath.h
+            v3.11.0/hoomd/VectorMath.h
 
     Note:
         Your code *must* return a value.

diff --git a/sphinx-doc/conf.py b/sphinx-doc/conf.py
@@ -63,8 +63,8 @@
 copyright = f'2009-{ year } The Regents of the University of Michigan'
 author = 'The Regents of the University of Michigan'
 
-version = '3.10.0'
-release = '3.10.0'
+version = '3.11.0'
+release = '3.11.0'
 
 language = 'en'