add Test

.github/workflows/CI.yml

@@ -0,0 +1,48 @@
+# https://github.com/Alexander-Barth/NCDatasets.jl/blob/master/.github/workflows/ci.yml
+name: CI
+on:
+  - push
+  - pull_request
+jobs:
+  test:
+    name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        version:
+          # - '1.3'
+          - '1'
+          # - 'nightly'
+        os:
+          # - ubuntu-latest
+          # - macOS-latest
+          - windows-latest
+        arch:
+          - x64
+    steps:
+      - uses: actions/checkout@v2
+      - uses: julia-actions/setup-julia@v1
+        with:
+          version: ${{ matrix.version }}
+          arch: ${{ matrix.arch }}
+      - uses: actions/cache@v1
+        env:
+          cache-name: cache-artifacts
+        with:
+          path: ~/.julia/artifacts
+          key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
+          restore-keys: |
+            ${{ runner.os }}-test-${{ env.cache-name }}-
+            ${{ runner.os }}-test-
+            ${{ runner.os }}-
+      - uses: julia-actions/julia-buildpkg@latest
+      - run: |
+          git config --global user.name Tester
+          git config --global user.email [email protected]
+      - uses: julia-actions/julia-runtest@latest
+        continue-on-error: ${{ matrix.version == 'nightly' }}
+      - uses: julia-actions/julia-processcoverage@v1
+      - uses: codecov/codecov-action@v1
+        with:
+          file: lcov.info

.github/workflows/CompatHelper.yml

@@ -0,0 +1,24 @@
+name: CompatHelper
+
+on:
+  schedule:
+    - cron: '15 23 */4 * *'
+
+jobs:
+  CompatHelper:
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        julia-version: [1.2.0]
+        julia-arch: [x86]
+        os: [ubuntu-latest]
+    steps:
+      - uses: julia-actions/setup-julia@latest
+        with:
+          version: ${{ matrix.julia-version }}
+      - name: Pkg.add("CompatHelper")
+        run: julia -e 'using Pkg; Pkg.add("CompatHelper")'
+      - name: CompatHelper.main()
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run: julia -e 'using CompatHelper; CompatHelper.main()'

.github/workflows/Documenter.yml

@@ -0,0 +1,20 @@
+name: Documenter
+on:
+  push:
+    branches: [master, main]
+    tags: [v*]
+  pull_request:
+    branches: [master, main]
+jobs:
+  Documenter:
+    name: Documentation
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+      - uses: julia-actions/julia-buildpkg@latest
+      - uses: julia-actions/julia-docdeploy@latest
+        env:
+          RASTERDATASOURCES_PATH: ".."
+          GKSwstype: "100"
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+          DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }}

.github/workflows/TagBot.yml

@@ -0,0 +1,15 @@
+name: TagBot
+on:
+  issue_comment:
+    types:
+      - created
+  workflow_dispatch:
+jobs:
+  TagBot:
+    if: github.event_name == 'workflow_dispatch' || github.actor == 'JuliaTagBot'
+    runs-on: ubuntu-latest
+    steps:
+      - uses: JuliaRegistries/TagBot@v1
+        with:
+          token: ${{ secrets.GITHUB_TOKEN }}
+          ssh: ${{ secrets.DOCUMENTER_KEY }}

Project.toml

@@ -13,6 +13,7 @@ MutableNamedTuples = "af6c499f-54b4-48cc-bbd2-094bba7533c7"
 Parameters = "d96e819e-fc66-5662-9728-84c9c7592b0a"
 Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
+Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 UnPack = "3a884ed6-31ef-47d7-9d2a-63182c4928ed"
 
 [compat]

README.md

@@ -2,8 +2,12 @@
 
 Boreal Ecosystem Productivity Simulator in Julia
 
-<!-- badges: start -->
-<!-- badges: end -->
+<!-- [![Stable](https://img.shields.io/badge/docs-stable-blue.svg)](https://CUG-hydro.github.io/BEPS.jl/stable) -->
+[![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://CUG-hydro.github.io/BEPS.jl/dev)
+[![CI](https://github.com/CUG-hydro/BEPS.jl/actions/workflows/CI.yml/badge.svg)](https://github.com/CUG-hydro/BEPS.jl/actions/workflows/CI.yml)
+[![Codecov](https://codecov.io/gh/CUG-hydro/BEPS.jl/branch/master/graph/badge.svg)](https://codecov.io/gh/CUG-hydro/BEPS.jl)
+
+> Dongdong Kong
 
 
 ## Usage

src/BEPS/BEPS.jl

@@ -10,9 +10,7 @@ include("sensible_heat.jl")
 include("surface_temperature.jl")
 include("transpiration.jl")
 
-export s_coszs, lai2
-  # , readparam
-  # , readcoef
+export s_coszs, lai2, readparam, readcoef
 export aerodynamic_conductance_jl, 
   sensible_heat_jl,
   surface_temperature_jl,

src/clang/BEPS_c.jl

@@ -152,7 +152,7 @@ end
 export inter_prg_c,
   Vcmax_Jmax, 
   # readparam, 
-  readcoef, 
+  # readcoef, 
   # lai2, s_coszs,
   Leaf_Temperatures, 
   latent_heat!, 

test/runtests.jl

@@ -0,0 +1,4 @@
+using Test
+using BEPS
+
+include("test_readparam.jl")

examples/test_01.jl → test/test_readparam.jl

@@ -1,5 +1,6 @@
 using Test
-
+using BEPS
+# import BEPS: readparam, readcoef
 
 @testset "readparam" begin
   lcs = [1, 2, 6, 9, 13, 40, -1]
@@ -22,7 +23,3 @@ end
     @test maximum(abs.(coef1 .- coef2)) == 0
   end
 end
-
-
-
-# Test init soil