Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

🚚 porting updated tools to repo #12

Closed
wants to merge 3 commits into from
Closed

🚚 porting updated tools to repo #12

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
00dc3d6
:truck: porting updated tools to repo
dmiller15 Oct 8, 2024
05ccb00
:wrench: refresh sentieon tools
dmiller15 Oct 23, 2024
9500ae2
update docker table
dmiller15 Oct 23, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 2 additions & 2 deletions docs/dockers_ont.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -12,8 +12,8 @@ nanocaller_merge.cwl|genomicslab/nanocaller:3.2.0
samtools_coverage.cwl|staphb/samtools:1.17
samtools_head.cwl|staphb/samtools:1.17
samtools_split.cwl|staphb/samtools:1.17
sentieon_LongReadSV.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202112.06
sentieon_LongReadSV.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202308.02
sentieon_ReadWriter.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202112.01_hifi
sentieon_minimap2.cwl|pgc-images.sbgenomics.com/d3b-bixu/sentieon:202112.01_hifi
sentieon_minimap2.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202308.02
sniffles.cwl|pgc-images.sbgenomics.com/d3b-bixu/sniffles:2.0.7
tar.cwl|None
6 changes: 3 additions & 3 deletions docs/dockers_pacbio.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -10,9 +10,9 @@ pbsv_call.cwl|quay.io/biocontainers/pbsv:2.9.0--h9ee0642_0
pbsv_discover.cwl|quay.io/biocontainers/pbsv:2.9.0--h9ee0642_0
samtools_head.cwl|staphb/samtools:1.17
samtools_split.cwl|staphb/samtools:1.17
sentieon_DNAscope_LongRead.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202112.01_hifi
sentieon_LongReadSV.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202112.06
sentieon_DNAscope_LongRead.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202308.03
sentieon_LongReadSV.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202308.02
sentieon_ReadWriter.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202112.01_hifi
sentieon_minimap2.cwl|pgc-images.sbgenomics.com/d3b-bixu/sentieon:202112.01_hifi
sentieon_minimap2.cwl|pgc-images.sbgenomics.com/hdchen/sentieon:202308.02
sniffles.cwl|pgc-images.sbgenomics.com/d3b-bixu/sniffles:2.0.7
tar.cwl|None
Loading
Loading