Refactoring #25

	# This workflow will build and test TurboRVB.

	name: TurboRVB linter-check, build, and test (GNU)

	on:
	push:
	branches: [ "main", "devel" ]
	pull_request:
	branches: [ "main", "devel" ]

	jobs:
	gnu-test:
	runs-on: ubuntu-latest
	steps:
	- name: Install gfortran and gcc
	run: \|
	sudo apt-get update
	sudo apt-get install gfortran

	- name: Install OpenBLAS and LAPACK
	run: sudo apt-get install libopenblas-dev liblapack-dev

	- name: Install OpenMPI
	run: sudo apt-get install openmpi-bin libopenmpi-dev

	- name: Install CMake
	run: sudo apt-get install cmake

	- name: Install and Setup Python
	uses: actions/setup-python@v3
	with:
	python-version: 3.8

	- name: Install python dependencies
	run: pip install numpy scipy pandas

	- name: Checkout the project repository
	uses: actions/checkout@v2

	- name: Lint TurboRVB with devel_tools/run_linter.py
	run: \|
	python ./devel_tools/run_linter.py .

	- name: Build TurboRVB with cmake serial and parallel versions
	run: \|
	cmake -S. -Bbuild -DEXT_PARALLEL=ON -DCMAKE_C_COMPILER=gcc -DCMAKE_Fortran_COMPILER=gfortran
	cmake --build build -j 2

	- name: Test TurboRVB with ctest both serial and parallel versions
	run: \|
	ctest --test-dir build --output-on-failure -j 2

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