Skip to content

Pull requests: nf-core/modules

New pull request New
135 Open 4,801 Closed
135 Open 4,801 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

chore(deps): update pre-commit hook astral-sh/ruff-pre-commit to v0.6.6
#6671 opened Sep 20, 2024 by renovate bot Loading…
2 tasks
Update json for meta yml
#6669 opened Sep 19, 2024 by mirpedrol Loading…
3
Fix bcftools stubs to behave like program
#6666 opened Sep 19, 2024 by fellen31 • Draft
17 tasks
Update mirtop version Ready for Review
#6663 opened Sep 18, 2024 by atrigila Loading…
16 of 17 tasks
Add nf-core module and subworkflow mirdeep2 help wanted Extra attention is needed
#6662 opened Sep 18, 2024 by atrigila Loading…
2 of 17 tasks
1
1
update star module to differentiate .sortedByCoord.out.bam and .Align…
#6661 opened Sep 18, 2024 by rannick Loading…
11 of 17 tasks
Script to fetch unique conda environments
#6659 opened Sep 17, 2024 by ewels • Draft
1
Refactor checkm2/databasedownload using aria2
#6654 opened Sep 17, 2024 by dialvarezs Loading…
4 of 17 tasks
7
Migrate umitools/group to nf-test
#6653 opened Sep 16, 2024 by SPPearce Loading…
4
Update container image to include RTGtools
#6639 opened Sep 13, 2024 by Jorisvansteenbrugge Loading…
1 of 2 tasks
1
3
Shigapass
#6636 opened Sep 13, 2024 by maxlcummins Loading…
12 of 17 tasks
13
new module: jvarkit vcf2table
#6631 opened Sep 12, 2024 by lindenb Loading…
12 of 14 tasks
4
Dysgy==1.6.4
#6630 opened Sep 12, 2024 by poddarharsh15 Loading…
17 tasks
Set BWA and bwamem2 index memory dynamically
#6628 opened Sep 11, 2024 by edmundmiller Loading…
@edmundmiller
4
Lighter
#6626 opened Sep 11, 2024 by vtorda Loading…
17 tasks
Add deepsomatic module scaffolding
#6622 opened Sep 10, 2024 by vaxyzek • Draft
17 tasks
4
new module : jvarkit/vcffilterjdk
#6621 opened Sep 10, 2024 by lindenb Loading…
13 of 14 tasks
44
Add motus prep_long
#6590 opened Sep 5, 2024 by sofstam Loading…
3 of 17 tasks
1
24
add crabs/dbimport from readsimulator pipeline
#6584 opened Sep 5, 2024 by famosab Loading…
3 of 17 tasks
1
1
add crabs/insilicopcr module from readsimulator
#6583 opened Sep 5, 2024 by famosab Loading…
6 of 17 tasks
1
Added nf-test for msisensor/scan conda-fail help wanted Extra attention is needed
#6562 opened Sep 5, 2024 by GallVp Loading…
2
chore(deps): update dotnet monorepo
#6559 opened Sep 5, 2024 by renovate bot Loading…
2 tasks
Add new module msisensorpro/baseline
#6536 opened Sep 2, 2024 by famosab • Draft
17 tasks
Added nf-test for kat/hist conda-fail help wanted Extra attention is needed
#6532 opened Sep 2, 2024 by GallVp Loading…
5
Added nf-test for hmtnote/annotate conda-fail help wanted Extra attention is needed linting
#6526 opened Sep 2, 2024 by GallVp Loading…
@chriswyatt1
4
ProTip! no:milestone will show everything without a milestone.