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23 Open 38 Closed
23 Open 38 Closed
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Issues list

Add WISP purity estimation workflow enhancement New feature or request
#147 opened Mar 4, 2025 by scwatts Release 2.1.0
@scwatts
Add panel resource creation workflow enhancement New feature or request
#146 opened Mar 4, 2025 by scwatts Release 2.1.0
@scwatts
Update documentation for WiGiTS v6.0 alignment documentation Improvements or additions to documentation
#145 opened Mar 4, 2025 by scwatts Release 2.0.0
Implement CIDER enhancement New feature or request
#144 opened Mar 4, 2025 by scwatts Release 2.1.0
@scwatts
Implement PEACH enhancement New feature or request
#143 opened Mar 4, 2025 by scwatts Release 2.1.0
@scwatts
Implement TEAL enhancement New feature or request
#142 opened Mar 4, 2025 by scwatts Release 2.1.0
@scwatts
Support ARM64/AArch64 architecture enhancement New feature or request
#139 opened Mar 3, 2025 by scwatts
Use pbzip2/pigz for asset decompression enhancement New feature or request
#135 opened Feb 25, 2025 by brainstorm
Sage this.mRefContext is null error bug Something isn't working
#133 opened Feb 24, 2025 by silkrp
5
Drive reference data and resource file data staging through CLI option enhancement New feature or request
#131 opened Feb 10, 2025 by scwatts Release 2.1.0
@luan-n-nguyen
1
Add vCHORD to oncoanalyser for HRD detection in targeted mode enhancement New feature or request
#118 opened Dec 6, 2024 by bounlu
1
Make circos plots optional in the orange report enhancement New feature or request
#113 opened Nov 29, 2024 by bounlu Release 2.0.0
@scwatts
1
Improve input validation for FASTQ enhancement New feature or request
#91 opened Aug 27, 2024 by scwatts Release 2.0.0
1
Add documentation describing workflow design choices enhancement New feature or request
#84 opened Aug 7, 2024 by scwatts
Implement basic sequence and alignment QC reporting enhancement New feature or request
#83 opened Aug 7, 2024 by scwatts
Determine whether certain Groovy syntax should be removed question Further information is requested
#82 opened Aug 7, 2024 by scwatts
Reintroduce MultiQC for workflow and analysis summary enhancement New feature or request
#81 opened Aug 7, 2024 by scwatts
Add reference data to iGenomes enhancement New feature or request
#80 opened Aug 7, 2024 by scwatts
Determine future feasibility of switch to nf-core bump-version question Further information is requested
#79 opened Aug 7, 2024 by scwatts
UMI support in WGTS mode enhancement New feature or request
#73 opened Jul 31, 2024 by SPPearce
1
Shrink reference data to support execution on GHA runners enhancement New feature or request
#71 opened Jul 30, 2024 by FriederikeHanssen
@scwatts
1
Markdup doesn't accept unpaired reads aligned with minimap2 bug Something isn't working
#55 opened Jun 5, 2024 by charlenelawdes
5
Assess suitability of local modules for transfer to nf-core/modules enhancement New feature or request
#50 opened May 29, 2024 by scwatts
@scwatts
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