Fix pipeline linting nf-core component behaviour #8733
LouisLeNezetAnnotations
73 errors and 31 warnings
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Run pipelines/test_create_app.py with Python 3.12 on ubuntu-latest
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Run test_test_utils.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_create_logo.py with Python 3.12 on ubuntu-latest
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Run test_utils.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_create.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_download.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_lint.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_list.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_refgenie.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_launch.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_params_file.py with Python 3.12 on ubuntu-latest
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Run test_lint_utils.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_rocrate.py with Python 3.12 on ubuntu-latest
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Run test_modules.py with Python 3.12 on ubuntu-latest
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Run test_pipelines.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_sync.py with Python 3.12 on ubuntu-latest
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Run test_cli.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_schema.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_create.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_lint.py with Python 3.12 on ubuntu-latest
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Run test_subworkflows.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_list.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_info.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_install.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_patch.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_update.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_bump_version.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_bump_version.py with Python 3.12 on ubuntu-latest
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Run test_components.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_remove.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_template_strings.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_template_strings.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_files_unchanged.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_merge_markers.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_merge_markers.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_version_consistency.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_version_consistency.py with Python 3.12 on ubuntu-latest
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Run modules/test_create.py with Python 3.12 on ubuntu-latest
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Run modules/test_create.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_multiqc_config.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_multiqc_config.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_local_component_structure.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_local_component_structure.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_nextflow_config.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_nextflow_config.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_plugin_includes.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_plugin_includes.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_configs.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_configs.py with Python 3.12 on ubuntu-latest
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Run modules/test_install.py with Python 3.12 on ubuntu-latest
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Run modules/test_install.py with Python 3.12 on ubuntu-latest
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Run modules/test_list.py with Python 3.12 on ubuntu-latest
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Run modules/test_list.py with Python 3.12 on ubuntu-latest
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Run modules/test_lint.py with Python 3.12 on ubuntu-latest
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Run modules/test_lint.py with Python 3.12 on ubuntu-latest
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Run modules/test_update.py with Python 3.12 on ubuntu-latest
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Run modules/test_update.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_schema_validation.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_schema_validation.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_files_exist.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_files_exist.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_nfcore_yml.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_nfcore_yml.py with Python 3.12 on ubuntu-latest
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Run modules/test_modules_json.py with Python 3.12 on ubuntu-latest
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Run modules/test_modules_json.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_if_empty_null.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_if_empty_null.py with Python 3.12 on ubuntu-latest
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Run modules/test_patch.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_modules_json.py with Python 3.12 on ubuntu-latest
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Run modules/test_patch.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_modules_json.py with Python 3.12 on ubuntu-latest
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Run components/test_components_generate_snapshot.py with Python 3.12 on ubuntu-latest
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Run components/test_components_generate_snapshot.py with Python 3.12 on ubuntu-latest
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Run components/test_components_utils.py with Python 3.12 on ubuntu-latest
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Run components/test_components_snapshot_test.py with Python 3.12 on ubuntu-latest
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Run modules/test_modules_utils.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_awstest.py with Python 3.12 on ubuntu-latest
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Run modules/test_remove.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_ci.py with Python 3.12 on ubuntu-latest
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Run modules/test_bump_versions.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_awsfulltest.py with Python 3.12 on ubuntu-latest
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Run modules/test_info.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_template_strings.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_files_unchanged.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_merge_markers.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_version_consistency.py with Python 3.12 on ubuntu-latest
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Run modules/test_create.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_multiqc_config.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_local_component_structure.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_nextflow_config.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_plugin_includes.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_configs.py with Python 3.12 on ubuntu-latest
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Run modules/test_install.py with Python 3.12 on ubuntu-latest
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Run modules/test_list.py with Python 3.12 on ubuntu-latest
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Run modules/test_lint.py with Python 3.12 on ubuntu-latest
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Run modules/test_update.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_schema_validation.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_files_exist.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_nfcore_yml.py with Python 3.12 on ubuntu-latest
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Run modules/test_modules_json.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_if_empty_null.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_modules_json.py with Python 3.12 on ubuntu-latest
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Run modules/test_patch.py with Python 3.12 on ubuntu-latest
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Run components/test_components_generate_snapshot.py with Python 3.12 on ubuntu-latest
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Artifacts
Produced during runtime
| Name | Size | |
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coverage_components__test_components_snapshot_test.py
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5.62 KB |
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coverage_components__test_components_utils.py
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5.31 KB |
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coverage_modules__test_bump_versions.py
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5.98 KB |
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coverage_modules__test_info.py
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6.06 KB |
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coverage_modules__test_modules_utils.py
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5.93 KB |
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coverage_modules__test_remove.py
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6.02 KB |
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coverage_pipelines__lint__test_actions_awsfulltest.py
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6.79 KB |
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coverage_pipelines__lint__test_actions_awstest.py
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6.78 KB |
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coverage_pipelines__lint__test_actions_ci.py
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6.79 KB |
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