feat: Install subworkflows with modules from different remotes #8757
mirpedrolAnnotations
20 errors and 60 warnings
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Run components/test_components_utils.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run modules/test_remove.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run modules/test_info.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run pipelines/test_lint.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run modules/test_patch.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run subworkflows/test_list.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run subworkflows/test_info.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run modules/test_install.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run subworkflows/test_remove.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run modules/test_list.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run subworkflows/test_patch.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run modules/test_modules_json.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run subworkflows/test_install.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run subworkflows/test_update.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run modules/test_update.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run subworkflows/test_lint.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run modules/test_lint.py with Python 3.12 on ubuntu-latest
Canceling since a higher priority waiting request for 'Python tests-3083' exists
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Run modules/test_lint.py with Python 3.12 on ubuntu-latest
The operation was canceled.
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Run components/test_components_generate_snapshot.py with Python 3.12 on ubuntu-latest
Canceling since a higher priority waiting request for 'Python tests-3083' exists
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Run components/test_components_generate_snapshot.py with Python 3.12 on ubuntu-latest
The operation was canceled.
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Run components/test_components_utils.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_local_component_structure.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_modules_json.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_if_empty_null.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_actions_awstest.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_merge_markers.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run components/test_components_snapshot_test.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_actions_ci.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_actions_awsfulltest.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_plugin_includes.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_actions_schema_validation.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_files_unchanged.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_configs.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_version_consistency.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_nfcore_yml.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_multiqc_config.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_files_exist.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_template_strings.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_nextflow_config.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_modules_utils.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_bump_version.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_list.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_create.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_params_file.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_remove.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_download.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_refgenie.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_create_logo.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_info.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_cli.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_bump_versions.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_lint_utils.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_components.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_rocrate.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_pipelines.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_lint.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_create_app.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_subworkflows.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_test_utils.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_modules.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_patch.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_list.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_create.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_info.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_install.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_remove.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_create.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_list.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_launch.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_schema.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_patch.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_sync.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_utils.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_modules_json.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_install.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_update.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_update.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_lint.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_lint.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run components/test_components_generate_snapshot.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
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coverage_components__test_components_snapshot_test.py
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5.65 KB |
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coverage_modules__test_bump_versions.py
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6.03 KB |
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coverage_modules__test_create.py
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5.99 KB |
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coverage_modules__test_modules_utils.py
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5.97 KB |
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coverage_pipelines__lint__test_actions_awsfulltest.py
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6.82 KB |
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coverage_pipelines__lint__test_actions_awstest.py
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6.82 KB |
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coverage_pipelines__lint__test_actions_ci.py
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6.81 KB |
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coverage_pipelines__lint__test_actions_schema_validation.py
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6.81 KB |
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coverage_pipelines__lint__test_configs.py
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6.82 KB |
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coverage_pipelines__lint__test_files_exist.py
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6.83 KB |
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coverage_pipelines__lint__test_files_unchanged.py
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6.83 KB |
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coverage_pipelines__lint__test_if_empty_null.py
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6.82 KB |
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coverage_pipelines__lint__test_local_component_structure.py
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6.81 KB |
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coverage_pipelines__lint__test_merge_markers.py
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6.82 KB |
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coverage_pipelines__lint__test_modules_json.py
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6.82 KB |
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coverage_pipelines__lint__test_multiqc_config.py
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6.88 KB |
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coverage_pipelines__lint__test_nextflow_config.py
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6.87 KB |
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coverage_pipelines__lint__test_nfcore_yml.py
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6.81 KB |
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coverage_pipelines__lint__test_plugin_includes.py
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6.81 KB |
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coverage_pipelines__lint__test_template_strings.py
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7.13 KB |
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coverage_pipelines__lint__test_version_consistency.py
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6.87 KB |
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coverage_pipelines__test_bump_version.py
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5.49 KB |
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coverage_pipelines__test_create.py
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5.43 KB |
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coverage_pipelines__test_create_app.py
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5.45 KB |
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coverage_pipelines__test_create_logo.py
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5.43 KB |
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coverage_pipelines__test_download.py
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5.81 KB |
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coverage_pipelines__test_launch.py
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5.58 KB |
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coverage_pipelines__test_list.py
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5.28 KB |
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coverage_pipelines__test_params_file.py
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5.52 KB |
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coverage_pipelines__test_refgenie.py
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5.3 KB |
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coverage_pipelines__test_rocrate.py
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5.49 KB |
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coverage_pipelines__test_schema.py
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5.53 KB |
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coverage_pipelines__test_sync.py
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5.53 KB |
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coverage_subworkflows__test_create.py
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6.9 KB |
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coverage_test_cli.py
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7.22 KB |
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coverage_test_components.py
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5.25 KB |
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coverage_test_lint_utils.py
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5.25 KB |
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coverage_test_modules.py
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5.96 KB |
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coverage_test_pipelines.py
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5.25 KB |
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coverage_test_subworkflows.py
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6.65 KB |
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coverage_test_test_utils.py
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5.25 KB |
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coverage_test_utils.py
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5.46 KB |
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