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    199 repositories

    • jazayeri-lab-to-nwb

      Public
      Collection of tools and scripts for converting data from the Jazayeri lab to NWB format.
      Python
      •
      MIT License
      •1•0•0•1•Updated Mar 3, 2025Mar 3, 2025

    • roiextractors

      Public
      Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by SpikeInterface.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •7•13•35•14•Updated Mar 3, 2025Mar 3, 2025

    • neuroconv

      Public
      Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •24•54•95•36•Updated Mar 3, 2025Mar 3, 2025

    • cohen-u01-to-nwb

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Feb 28, 2025Feb 28, 2025

    • dandi-hugo-example

      Public
      example of website using hugo
      HTML
      •
      Apache License 2.0
      •0•0•0•1•Updated Feb 28, 2025Feb 28, 2025

    • kind-lab-to-nwb

      Public
      NWB Conversion project for the Kind lab.
      Python
      •
      MIT License
      •0•1•1•2•Updated Feb 28, 2025Feb 28, 2025

    • ndx-sound

      Public
      NWB extension of sounds
      ndx
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•2•Updated Feb 27, 2025Feb 27, 2025

    • dicarlo-lab-to-nwb

      Public
      Python
      •
      MIT License
      •1•0•0•1•Updated Feb 26, 2025Feb 26, 2025

    • ndx-ophys-devices

      Public
      This is an NWB extension for storing metadata of devices used in optical experimental setup (microscopy, fiber photometry, optogenetic stimulation etc.)
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•1•1•Updated Feb 26, 2025Feb 26, 2025

    • ndx-microscopy

      Public
      An enhancement to core NWB schema types related to microscopy data.
      Python
      •
      MIT License
      •0•0•6•1•Updated Feb 26, 2025Feb 26, 2025

    • jadhav-lab-to-nwb

      Public
      Python
      •
      MIT License
      •0•0•2•0•Updated Feb 25, 2025Feb 25, 2025

    • dan-lab-to-nwb

      Public
      Python
      •
      MIT License
      •0•0•1•0•Updated Feb 25, 2025Feb 25, 2025

    • IBL-to-nwb

      Public
      Conversion of IBL data to NWB format.
      nwb-conversion
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •4•3•9•3•Updated Feb 24, 2025Feb 24, 2025

    • catalystneuro-dendro-apps

      Public
      CatalystNeuro Dendro Apps
      Python
      •
      MIT License
      •0•0•0•0•Updated Feb 19, 2025Feb 19, 2025

    • catalystneuro.github.io

      Public
      TypeScript
      •0•0•0•3•Updated Feb 18, 2025Feb 18, 2025

    • hnasko-lab-to-nwb

      Public
      NWB Conversion project for the Hnasko Lab
      Python
      •
      MIT License
      •0•0•1•0•Updated Feb 17, 2025Feb 17, 2025

    • agents

      Public
      CatalystNeuro Agents
      Python
      •0•1•1•0•Updated Feb 14, 2025Feb 14, 2025

    • constantinople-lab-to-nwb

      Public
      NWB Conversion project for the Constantinople lab at NYU Center for Neural Science.
      Jupyter Notebook
      •
      MIT License
      •0•0•5•0•Updated Feb 14, 2025Feb 14, 2025

    • mcp

      Public
      CatalystNeuro MCP servers
      Python
      •
      MIT License
      •0•1•2•0•Updated Feb 8, 2025Feb 8, 2025

    • git2rag

      Public
      Smart and efficient embedding of your Github repository contents
      Python
      •
      MIT License
      •0•1•0•0•Updated Feb 7, 2025Feb 7, 2025

    • dandi.github.io

      Public
      Website code for DANDI Project
      SCSS
      •14•0•0•0•Updated Feb 4, 2025Feb 4, 2025

    • schneider-lab-to-nwb

      Public
      Python
      •
      MIT License
      •1•0•1•0•Updated Jan 28, 2025Jan 28, 2025

    • mcp_read_images

      Public
      JavaScript
      •
      MIT License
      •0•5•0•0•Updated Jan 26, 2025Jan 26, 2025

    • ndx-events

      Public
      NWB extension to store event and TTL pulse data
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •8•0•0•0•Updated Jan 23, 2025Jan 23, 2025

    • photon-flux-estimation

      Public
      A Python library for estimating photon flux from multiphoton imaging data. This package provides tools to compute photon sensitivity and generate photon flux visualizations from imaging data.
      Python
      •
      MIT License
      •0•0•0•0•Updated Jan 23, 2025Jan 23, 2025

    • cn-website

      Public
      TypeScript
      •0•0•0•2•Updated Jan 22, 2025Jan 22, 2025

    • cookiecutter-my-lab-to-nwb-template

      Public
      The standard cookiecutter template for all lab-specific NWB conversions.
      Python
      •
      MIT License
      •1•2•3•1•Updated Jan 22, 2025Jan 22, 2025

    • example-notebooks

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •16•0•0•0•Updated Jan 16, 2025Jan 16, 2025

    • catalystneuro.github.io_old

      Public
      TypeScript
      •26k•0•0•1•Updated Jan 15, 2025Jan 15, 2025

    • nelson-lab-to-nwb

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Dec 23, 2024Dec 23, 2024