NGLess and related utilities

All

8 repositories

ngless
Public
NGLess: NGS with less work
science bioinformatics genomics ngs next-generation-sequencing metagenomics bioinformatics-pipeline fastq-format fastq haskell-language
Haskell
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Other
•25•145•35•0•Updated Aug 13, 2024Aug 13, 2024
ng-meta-profiler
Public
Profiler for metagenomics based on NGLess
bioinformatics metagenomics microbiome ngless
Shell
•2•13•1•0•Updated Feb 22, 2024Feb 22, 2024
ngless-contrib
Public
A collection of NGLess modules open to community contributions
bioinformatics pipeline metagenomics ngless
Shell
•2•3•2•0•Updated Aug 30, 2023Aug 30, 2023
vim-ngless
Public
Vim plugin to support ngless script editing
ngless vim-plugins
Vim Script
•0•0•0•0•Updated Jun 13, 2022Jun 13, 2022
interval-to-int
Public
Interval map structure in Haskell designed for NGLess
interval-map
Haskell
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Other
•0•0•0•0•Updated Jun 2, 2022Jun 2, 2022
nglesspy
Public
NGLess as a Python embedded language (experimental)
python experimental genomics next-generation-sequencing metagenomics domain-specific-language ngless embedded-language python-embedded-language
Python
•1•2•0•0•Updated Jul 16, 2020Jul 16, 2020
ngless-demos
Public
Generate demos for NGLess
Python
•0•0•0•0•Updated Feb 24, 2020Feb 24, 2020
ngless2018benchmark
Public
Benchmarking ngless
benchmark bioinformatics next-generation-sequencing ngless benchmarking benchmarking-ngless
Python
•0•0•0•0•Updated Jun 13, 2019Jun 13, 2019