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PBM-1347: save restore meta with error if retore fails before start #1074

PBM-1347: save restore meta with error if retore fails before start

PBM-1347: save restore meta with error if retore fails before start #1074

Triggered via pull request November 4, 2024 19:25
Status Failure
Total duration 22s
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trivy.yml

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3 errors
Trivy
Process completed with exit code 1.
test_PBM-1211.test_pitr_PBM_T268[physical]: psmdb-testing/pbm-functional/pytest/test_PBM-1211.py#L79
AssertionError: Starting restore 2024-11-04T19:44:07.347981699Z to point-in-time 2024-11-04T19:42:54 from '2024-11-04T19:39:14Z'..........................Started physical restore. Waiting to finish...............Error: operation failed with: replay pitr oplog: reply oplog: replay chunk 1730749156.1730749220: apply oplog for chunk: applying an entry: op: {"Timestamp":{"T":1730749191,"I":5},"Term":1,"Hash":null,"Version":2,"Operation":"i","Namespace":"test.test","Object":[{"Key":"_id","Value":"6729230791733044b0351d75"},{"Key":"doc","Value":4}],"Query":null,"UI":{"Subtype":4,"Data":"SJczOec0QOesQyBLRZIsLQ=="},"LSID":"SAAAAAVpZAAQAAAABAPjREav10DMjkmlSANcGWMFdWlkACAAAAAAY5mrDaxi8gv8RmdTsQ+1j7fmkr7JUsabhNmXAheU0fgA","TxnNumber":5,"PrevOpTime":"HAAAABF0cwAAAAAAAAAAABJ0AP//////////AA==","MultiOpType":null} | merr <nil>: applyOps: (NotWritablePrimary) not primary {"t":{"$date":"2024-11-04T19:44:47.231+00:00"},"s":"I", "c":"CONTROL", "id":23285, "ctx":"-","msg":"Automatically disabling TLS 1.0, to force-enable TLS 1.0 specify --sslDisabledProtocols 'none'"} {"t":{"$date":"2024-11-04T19:44:47.232+00:00"},"s":"I", "c":"NETWORK", "id":4915701, "ctx":"main","msg":"Initialized wire specification","attr":{"spec":{"incomingExternalClient":{"minWireVersion":0,"maxWireVersion":13},"incomingInternalClient":{"minWireVersion":0,"maxWireVersion":13},"outgoing":{"minWireVersion":0,"maxWireVersion":13},"isInternalClient":true}}} {"t":{"$date":"2024-11-04T19:44:47.232+00:00"},"s":"W", "c":"ASIO", "id":22601, "ctx":"main","msg":"No TransportLayer configured during NetworkInterface startup"} {"t":{"$date":"2024-11-04T19:44:47.232+00:00"},"s":"I", "c":"NETWORK", "id":4648601, "ctx":"main","msg":"Implicit TCP FastOpen unavailable. If TCP FastOpen is required, set tcpFastOpenServer, tcpFastOpenClient, and tcpFastOpenQueueSize."} {"t":{"$date":"2024-11-04T19:44:47.233+00:00"},"s":"W", "c":"ASIO", "id":22601, "ctx":"main","msg":"No TransportLayer configured during NetworkInterface startup"} {"t":{"$date":"2024-11-04T19:44:47.233+00:00"},"s":"W", "c":"ASIO", "id":22601, "ctx":"main","msg":"No TransportLayer configured during NetworkInterface startup"} {"t":{"$date":"2024-11-04T19:44:47.233+00:00"},"s":"I", "c":"REPL", "id":5123008, "ctx":"main","msg":"Successfully registered PrimaryOnlyService","attr":{"service":"TenantMigrationDonorService","ns":"config.tenantMigrationDonors"}} {"t":{"$date":"2024-11-04T19:44:47.233+00:00"},"s":"I", "c":"REPL", "id":5123008, "ctx":"main","msg":"Successfully registered PrimaryOnlyService","attr":{"service":"TenantMigrationRecipientService","ns":"config.tenantMigrationRecipients"}} {"t":{"$date":"2024-11-04T19:44:47.233+00:00"},"s":"I", "c":"CONTROL", "id":5945603, "ctx":"main","msg":"Multi threading initialized"} {"t":{"$date":"2024-11-04T19:44:47.233+00:00"},"s":"I", "c":"CONTROL", "id":4615611, "ctx":"initandlisten","msg":"MongoDB starting","attr":{"pid":559,"port":27275,"dbPath":"/var/lib/mongo","architecture":"64-bit","host":"rs201"}} {"t":{"$date":"2024-11-04T19:44:47.233+00:00"},"s":"I", "c":"CONTROL", "id":23403, "ctx":"initandlisten","msg":"Build Info","attr":{"buildInfo":{"version":"5.0.29-25","gitVersion":"6ed5ea3065f1daafa7661d1c05d20c50b614a96a","openSSLVersion":"OpenSSL 1.1.1k FIPS 25 Mar 2021","modules":[],"allocator":"tcmalloc","environment":{"distarch":"x86_64","target_arch":"x86_64"}}}} {"t":{"$date":"2024-11-04T19:44:47.233+00:00"},"s":"I", "c":"CONTROL", "id":51765, "ctx":"initandlisten","msg":"Operating System","attr":{"os":{"name":"Oracle Linux Server release 8.10","version":"Kernel 6.5.0-1025-azure"}}} {"t":{"$date":"2024-11-04T19:44:47.233+00:00"},"s":"I", "c":"CONTROL", "id":21951, "ctx":"initandlisten","msg":"Options set by command line","attr":{"options":{"config":"/tmp/pbmMongdTmpConf2428773234","net":{"bindIp":"localhost","port":27275},"replication":{"replSet":"rs2"},"setParameter":{"disableLogicalSessionCacheRefresh":"true","takeUnstableCheckpointOnShutdown":"true"},"storage":{"dbPath":"/var/lib/mongo","directoryPerDB":false,"wiredTiger":{"collectionConfig":{"blockCompressor":"snappy"},"engineConfig":{"directoryForIndexes":false,"journalCompressor":"snappy"},"indexConfig":{"prefixCompression":true}}},"systemLog":{"destination":"file","path":"/var/lib/mongo/pbm.restore.log"}}}} {"t":{"$date":"2024-11-04T19:44:47.235+00:00"},"s":"I", "c":"STORAGE", "id":22270, "ctx":"initandlisten","msg":"Storage engine to use detected by data files","attr":{"dbpath":"/var/lib/mongo","storageEngine":"wiredTiger"}} {"t":{"$date":"2024-11-04T19:44:47.235+00:00"},"s":"I", "c":"STORAGE", "id":22315, "ctx":"initandlisten","msg":"Opening WiredTiger","attr":{"config":"create,cache_size=7478M,session_max=33000,eviction=(threads_min=4,threads_max=4),config_base=false,statistics=(fast),log=(enabled=true,archive=true,path=journal,compressor=snappy),builtin_extension_config=(zstd=(compression_level=6)),file_manager=(close_idle_time=600,close_scan_interval=10,close_handle_minimum=2000),statistics_log=(wait=0),verbose=[recovery_progress,checkpoint_progress,compact_progress],"}} {"t":{"$date":"2024-11-04T19:44:47.453+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:453782][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_PROGRESS] Recovering log 5 through 6"}} {"t":{"$date":"2024-11-04T19:44:47.481+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:481940][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_PROGRESS] Recovering log 6 through 6"}} {"t":{"$date":"2024-11-04T19:44:47.535+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:535515][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_ALL] Main recovery loop: starting at 5/39808 to 6/256"}} {"t":{"$date":"2024-11-04T19:44:47.584+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:584809][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_PROGRESS] Recovering log 5 through 6"}} {"t":{"$date":"2024-11-04T19:44:47.622+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:622941][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_PROGRESS] Recovering log 6 through 6"}} {"t":{"$date":"2024-11-04T19:44:47.645+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:645982][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_PROGRESS] recovery log replay has successfully finished and ran for 192 milliseconds"}} {"t":{"$date":"2024-11-04T19:44:47.646+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:646020][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_ALL] Set global recovery timestamp: (0, 0)"}} {"t":{"$date":"2024-11-04T19:44:47.646+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:646031][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_ALL] Set global oldest timestamp: (0, 0)"}} {"t":{"$date":"2024-11-04T19:44:47.646+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:646817][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_PROGRESS] recovery rollback to stable has successfully finished and ran for 0 milliseconds"}} {"t":{"$date":"2024-11-04T19:44:47.648+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:648725][559:0x7f3a36c9ac00], WT_SESSION.checkpoint: [WT_VERB_CHECKPOINT_PROGRESS] saving checkpoint snapshot min: 1, snapshot max: 1 snapshot count: 0, oldest timestamp: (0, 0) , meta checkpoint timestamp: (0, 0) base write gen: 40"}} {"t":{"$date":"2024-11-04T19:44:47.650+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:650988][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_PROGRESS] recovery checkpoint has successfully finished and ran for 4 milliseconds"}} {"t":{"$date":"2024-11-04T19:44:47.651+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:651022][559:0x7f3a36c9ac00], txn-recover: [WT_VERB_RECOVERY_PROGRESS] recovery was completed successfully and took 197ms, including 192ms for the log replay, 0ms for the rollback to stable, and 4ms for the checkpoint."}} {"t":{"$date":"2024-11-04T19:44:47.651+00:00"},"s":"I", "c":"STORAGE", "id":4795906, "ctx":"initandlisten","msg":"WiredTiger opened","attr":{"durationMillis":415}} {"t":{"$date":"2024-11-04T19:44:47.651+00:00"},"s":"I", "c":"RECOVERY", "id":23987, "ctx":"initandlisten","msg":"WiredTiger recoveryTimestamp","attr":{"recoveryTimestamp":{"$timestamp":{"t":0,"i":0}}}} {"t":{"$date":"2024-11-04T19:44:47.660+00:00"},"s":"I", "c":"STORAGE", "id":22383, "ctx":"initandlisten","msg":"The size storer reports that the oplog contains","attr":{"numRecords":33,"dataSize":8054}} {"t":{"$date":"2024-11-04T19:44:47.660+00:00"},"s":"I", "c":"STORAGE", "id":22384, "ctx":"initandlisten","msg":"Scanning the oplog to determine where to place markers for truncation"} {"t":{"$date":"2024-11-04T19:44:47.661+00:00"},"s":"I", "c":"STORAGE", "id":22382, "ctx":"initandlisten","msg":"WiredTiger record store oplog processing finished","attr":{"durationMillis":0}} {"t":{"$date":"2024-11-04T19:44:47.671+00:00"},"s":"I", "c":"STORAGE", "id":22262, "ctx":"initandlisten","msg":"Timestamp monitor starting"} {"t":{"$date":"2024-11-04T19:44:47.672+00:00"},"s":"W", "c":"CONTROL", "id":22120, "ctx":"initandlisten","msg":"Access control is not enabled for the database. Read and write access to data and configuration is unrestricted. You can use percona-server-mongodb-enable-auth.sh to fix it","tags":["startupWarnings"]} {"t":{"$date":"2024-11-04T19:44:47.672+00:00"},"s":"W", "c":"CONTROL", "id":22178, "ctx":"initandlisten","msg":"/sys/kernel/mm/transparent_hugepage/enabled is 'always'. We suggest setting it to 'never' in this binary version","tags":["startupWarnings"]} {"t":{"$date":"2024-11-04T19:44:47.679+00:00"},"s":"I", "c":"NETWORK", "id":4915702, "ctx":"initandlisten","msg":"Updated wire specification","attr":{"oldSpec":{"incomingExternalClient":{"minWireVersion":0,"maxWireVersion":13},"incomingInternalClient":{"minWireVersion":0,"maxWireVersion":13},"outgoing":{"minWireVersion":0,"maxWireVersion":13},"isInternalClient":true},"newSpec":{"incomingExternalClient":{"minWireVersion":0,"maxWireVersion":13},"incomingInternalClient":{"minWireVersion":13,"maxWireVersion":13},"outgoing":{"minWireVersion":13,"maxWireVersion":13},"isInternalClient":true}}} {"t":{"$date":"2024-11-04T19:44:47.679+00:00"},"s":"I", "c":"STORAGE", "id":5071100, "ctx":"initandlisten","msg":"Clearing temp directory"} {"t":{"$date":"2024-11-04T19:44:47.694+00:00"},"s":"I", "c":"CONTROL", "id":20536, "ctx":"initandlisten","msg":"Flow Control is enabled on this deployment"} {"t":{"$date":"2024-11-04T19:44:47.694+00:00"},"s":"W", "c":"SHARDING", "id":22075, "ctx":"initandlisten","msg":"Not started with --shardsvr, but a shardIdentity document was found on disk","attr":{"namespace":"admin.system.version","shardIdentityDocument":{"_id":"shardIdentity","shardName":"rs2","clusterId":{"$oid":"672922cfaf29b7ca69d35a1e"},"configsvrConnectionString":"rscfg/rscfg01:27017"}}} {"t":{"$date":"2024-11-04T19:44:47.695+00:00"},"s":"I", "c":"FTDC", "id":20625, "ctx":"initandlisten","msg":"Initializing full-time diagnostic data capture","attr":{"dataDirectory":"/var/lib/mongo/diagnostic.data"}} {"t":{"$date":"2024-11-04T19:44:47.696+00:00"},"s":"I", "c":"-", "id":4939300, "ctx":"monitoring-keys-for-HMAC","msg":"Failed to refresh key cache","attr":{"error":"ReadConcernMajorityNotAvailableYet: Read concern majority reads are currently not possible.","nextWakeupMillis":200}} {"t":{"$date":"2024-11-04T19:44:47.696+00:00"},"s":"I", "c":"REPL", "id":6015317, "ctx":"initandlisten","msg":"Setting new configuration state","attr":{"newState":"ConfigStartingUp","oldState":"ConfigPreStart"}} {"t":{"$date":"2024-11-04T19:44:47.697+00:00"},"s":"I", "c":"REPL", "id":4280500, "ctx":"initandlisten","msg":"Attempting to create internal replication collections"} {"t":{"$date":"2024-11-04T19:44:47.699+00:00"},"s":"I", "c":"REPL", "id":4280501, "ctx":"initandlisten","msg":"Attempting to load local voted for document"} {"t":{"$date":"2024-11-04T19:44:47.699+00:00"},"s":"I", "c":"REPL", "id":21311, "ctx":"initandlisten","msg":"Did not find local initialized voted for document at startup"} {"t":{"$date":"2024-11-04T19:44:47.699+00:00"},"s":"I", "c":"REPL", "id":4280502, "ctx":"initandlisten","msg":"Searching for local Rollback ID document"} {"t":{"$date":"2024-11-04T19:44:47.700+00:00"},"s":"I", "c":"REPL", "id":21529, "ctx":"initandlisten","msg":"Initializing rollback ID","attr":{"rbid":1}} {"t":{"$date":"2024-11-04T19:44:47.700+00:00"},"s":"I", "c":"REPL", "id":4280504, "ctx":"initandlisten","msg":"Cleaning up any partially applied oplog batches & reading last op from oplog"} {"t":{"$date":"2024-11-04T19:44:47.701+00:00"},"s":"I", "c":"REPL", "id":21546, "ctx":"initandlisten","msg":"Recovering from an unstable checkpoint","attr":{"topOfOplog":{"ts":{"$timestamp":{"t":1730749154,"i":57}},"t":1},"appliedThrough":{"ts":{"$timestamp":{"t":1730749154,"i":57}},"t":1}}} {"t":{"$date":"2024-11-04T19:44:47.701+00:00"},"s":"I", "c":"REPL", "id":21548, "ctx":"initandlisten","msg":"Starting recovery oplog application at the appliedThrough through the top of the oplog","attr":{"appliedThrough":{"ts":{"$timestamp":{"t":1730749154,"i":57}},"t":1},"topOfOplog":{"ts":{"$timestamp":{"t":1730749154,"i":57}},"t":1}}} {"t":{"$date":"2024-11-04T19:44:47.701+00:00"},"s":"I", "c":"REPL", "id":21549, "ctx":"initandlisten","msg":"No oplog entries to apply for recovery. Start point is at the top of the oplog"} {"t":{"$date":"2024-11-04T19:44:47.702+00:00"},"s":"I", "c":"STORAGE", "id":22430, "ctx":"initandlisten","msg":"WiredTiger message","attr":{"message":"[1730749487:702879][559:0x7f3a36c9ac00], WT_SESSION.checkpoint: [WT_VERB_CHECKPOINT_PROGRESS] saving checkpoint snapshot min: 31, snapshot max: 31 snapshot count: 0, oldest timestamp: (1730749154, 57) , meta checkpoint timestamp: (0, 0) base write gen: 40"}} {"t":{"$date":"2024-11-04T19:44:47.707+00:00"},"s":"I", "c":"REPL", "id":4280505, "ctx":"initandlisten","msg":"Creating any necessary TenantMigrationAccessBlockers for unfinished migrations"} {"t":{"$date":"2024-11-04T19:44:47.707+00:00"},"s":"I", "c":"REPL", "id":4280506, "ctx":"initandlisten","msg":"Reconstructing prepared transactions"} {"t":{"$date":"2024-11-04T19:44:47.708+00:00"},"s":"I", "c":"REPL", "id":4280507, "ctx":"initandlisten","msg":"Loaded replica set config, scheduled callback to set local config"} {"t":{"$date":"2024-11-04T19:44:47.708+00:00"},"s":"I", "c":"REPL", "id":4280508, "ctx":"ReplCoord-0","msg":"Attempting to set local replica set config; validating config for startup"} {"t":{"$date":"2024-11-04T19:44:47.709+00:00"},"s":"I", "c":"REPL", "id":40440, "ctx":"initandlisten","msg":"Starting the TopologyVersionObserver"} {"t":{"$date":"2024-11-04T19:44:47.709+00:00"},"s":"I", "c":"REPL", "id":40445, "ctx":"TopologyVersionObserver","msg":"Started TopologyVersionObserver"} {"t":{"$date":"2024-11-04T19:44:47.709+00:00"},"s":"I", "c":"NETWORK", "id":23015, "ctx":"listener","msg":"Listening on","attr":{"address":"/tmp/mongodb-27275.sock"}} {"t":{"$date":"2024-11-04T19:44:47.709+00:00"},"s":"I", "c":"NETWORK", "id":23015, "ctx":"listener","msg":"Listening on","attr":{"address":"127.0.0.1"}} {"t":{"$date":"2024-11-04T19:44:47.709+00:00"},"s":"I", "c":"NETWORK", "id":23016, "ctx":"listener","msg":"Waiting for connections","attr":{"port":27275,"ssl":"off"}} {"t":{"$date":"2024-11-04T19:44:47.741+00:00"},"s":"I", "c":"NETWORK", "id":22943, "ctx":"listener","msg":"Connection accepted","attr":{"remote":"127.0.0.1:41826","uuid":"28ead35c-ea7a-40b7-91aa-57e4a24728a0","connectionId":1,"connectionCount":1}} {"t":{"$date":"2024-11-04T19:44:47.741+00:00"},"s":"I", "c":"NETWORK", "id":22943, "ctx":"listener","msg":"Connection accepted","attr":{"remote":"127.0.0.1:41842","uuid":"3de13dd1-aa67-43fe-9852-ef7d24e6c78c","connectionId":3,"connectionCount":2}} {"t":{"$date":"2024-11-04T19:44:47.742+00:00"},"s":"I", "c":"NETWORK", "id":51800, "ctx":"conn1","msg":"client metadata","attr":{"remote":"127.0.0.1:41826","client":"conn1","negotiatedCompressors":[],"doc":{"application":{"name":"pbm-physical-restore"},"driver":{"name":"mongo-go-driver","version":"1.16.0"},"os":{"type":"linux","architecture":"amd64"},"platform":"go1.22.8","env":{"container":{"runtime":"docker"}}}}} {"t":{"$date":"2024-11-04T19:44:47.742+00:00"},"s":"W", "c":"COMMAND", "id":5578800, "ctx":"conn3","msg":"Deprecated operation requested. The client driver may require an upgrade in order to ensure compatibility with future server versions. 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