move from setup.py to pyproject.toml + CI improvements
#602
Workflow file for this run
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| name: Install test | |
| on: | |
| push: | |
| branches: | |
| - develop | |
| pull_request: | |
| branches: | |
| - develop | |
| schedule: | |
| - cron: '25 16 * * 0' | |
| release: | |
| types: | |
| - published | |
| pull_request_review: | |
| types: | |
| - submitted | |
| env: | |
| CACHE_NUMBER: 0 # increase to reset cache manually | |
| jobs: | |
| dynamic-matrix: | |
| # from https://michaelheap.com/dynamic-matrix-generation-github-actions/ | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - id: get-matrix | |
| run: | | |
| echo "get matrix for event ${{ github.event_name }}" | |
| echo "::echo::on" | |
| python .github/actions/dynamic_matrix.py ${{ github.event_name }} | |
| outputs: | |
| os_matrix: ${{ steps.get-matrix.outputs.os_matrix }} | |
| python_version_matrix: ${{ steps.get-matrix.outputs.python_version_matrix }} | |
| build: | |
| needs: dynamic-matrix | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ${{ fromJson(needs.dynamic-matrix.outputs.os_matrix) }} | |
| python-version: ${{ fromJson(needs.dynamic-matrix.outputs.python_version_matrix) }} | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| name: python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| # cache conda from https://dev.to/epassaro/caching-anaconda-environments-in-github-actions-5hde | |
| # and https://github.com/conda-incubator/setup-miniconda#caching | |
| - name: Setup Mambaforge | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniforge-variant: Mambaforge | |
| miniforge-version: latest | |
| activate-environment: xsar | |
| python-version: ${{ matrix.python-version }} | |
| condarc-file: condarc.yml | |
| use-mamba: true | |
| use-only-tar-bz2: true | |
| - name: Set cache date | |
| run: | | |
| echo "DATE=$(date +'%Y%m%d')" >> $GITHUB_ENV | |
| - uses: actions/cache@v4 | |
| with: | |
| path: ~/conda_pkgs_dir | |
| key: conda-cache-${{ matrix.os }}-${{ matrix.python-version }}-${{ hashFiles('environment.yml') }}-${{ env.DATE }}-${{ env.CACHE_NUMBER }} | |
| id: cache | |
| - name: Cache found | |
| run: echo Cache found | |
| if: steps.cache.outputs.cache-hit == 'true' | |
| # update conda. Cache will be used if available | |
| # we remove python from environment.yml, because we want the version from matrix.python-version | |
| - name: update conda | |
| run: | | |
| cat environment.yml | egrep -vw 'python' > ~/environment-nopython.yml | |
| mamba env update -n xsar -f ~/environment-nopython.yml | |
| - name: List Packages | |
| run: | | |
| python -V | |
| conda info | |
| conda list | |
| - name: Minimal install | |
| run: pip install -e . | |
| - name: Minimal pytest | |
| run: | | |
| pip install pytest dill | |
| pytest | |
| # check if docs has changed | |
| - uses: dorny/paths-filter@v3 | |
| id: changes | |
| if: github.event_name != 'schedule' | |
| with: | |
| filters: | | |
| docs: | |
| - 'docs/**' | |
| # run only if some file in 'doc' folder was changed | |
| - name: Complete notebook install | |
| if: github.event_name == 'schedule' || steps.changes.outputs.docs == 'true' | |
| run: pip install -r requirements.txt | |
| - name: Documetation test | |
| if: github.event_name == 'schedule' || steps.changes.outputs.docs == 'true' | |
| run: | | |
| cd docs | |
| make html | |