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-fixes a bug in the liftover logic whereby when the alleles couldn't … dsp-appsec-trivy #564: Pull request #1956 synchronize by yfarjoun
April 5, 2024 22:43 1m 32s yfarjoun:yf_fix_edgecase_liftover_vcf
yfarjoun:yf_fix_edgecase_liftover_vcf
April 5, 2024 22:43 1m 32s
-fixes a bug in the liftover logic whereby when the alleles couldn't … dsp-appsec-trivy #563: Pull request #1956 opened by yfarjoun
April 5, 2024 18:35 1m 38s yfarjoun:yf_fix_edgecase_liftover_vcf
yfarjoun:yf_fix_edgecase_liftover_vcf
April 5, 2024 18:35 1m 38s
Allow fingerprinting of SAM files that only have a partial dictionary match to the haplotype map dsp-appsec-trivy #562: Pull request #1955 synchronize by yfarjoun
April 5, 2024 15:56 1m 37s yfarjoun:yf_allow_only_partially_matching_dictionaries_in_crosscheck
yfarjoun:yf_allow_only_partially_matching_dictionaries_in_crosscheck
April 5, 2024 15:56 1m 37s
Allow fingerprinting of SAM files that only have a partial dictionary match to the haplotype map dsp-appsec-trivy #561: Pull request #1955 synchronize by yfarjoun
April 5, 2024 00:59 1m 42s yfarjoun:yf_allow_only_partially_matching_dictionaries_in_crosscheck
yfarjoun:yf_allow_only_partially_matching_dictionaries_in_crosscheck
April 5, 2024 00:59 1m 42s
Allow fingerprinting of SAM files that only have a partial dictionary match to the haplotype map dsp-appsec-trivy #560: Pull request #1955 opened by yfarjoun
April 3, 2024 19:15 1m 53s yfarjoun:yf_allow_only_partially_matching_dictionaries_in_crosscheck
yfarjoun:yf_allow_only_partially_matching_dictionaries_in_crosscheck
April 3, 2024 19:15 1m 53s
Reject piped input (/dev/stdin) for BedToIntervalList dsp-appsec-trivy #559: Pull request #1918 synchronize by cmnbroad
March 12, 2024 14:46 1m 39s can_bed2intervallist_stdin_check
can_bed2intervallist_stdin_check
March 12, 2024 14:46 1m 39s
Reject piped input (/dev/stdin) for BedToIntervalList dsp-appsec-trivy #558: Pull request #1918 synchronize by cmnbroad
March 12, 2024 14:31 1m 43s can_bed2intervallist_stdin_check
can_bed2intervallist_stdin_check
March 12, 2024 14:31 1m 43s
Cloudify RevertSam dsp-appsec-trivy #557: Pull request #1949 synchronize by takutosato
March 11, 2024 20:32 1m 26s ts_revertsam_lee
ts_revertsam_lee
March 11, 2024 20:32 1m 26s
Cloudify RevertSam dsp-appsec-trivy #556: Pull request #1949 synchronize by takutosato
March 11, 2024 15:51 2m 0s ts_revertsam_lee
ts_revertsam_lee
March 11, 2024 15:51 2m 0s
Cloudify RevertSam dsp-appsec-trivy #555: Pull request #1949 synchronize by takutosato
March 11, 2024 15:24 1m 38s ts_revertsam_lee
ts_revertsam_lee
March 11, 2024 15:24 1m 38s
Cloudify RevertSam dsp-appsec-trivy #554: Pull request #1949 synchronize by takutosato
March 11, 2024 15:13 1m 31s ts_revertsam_lee
ts_revertsam_lee
March 11, 2024 15:13 1m 31s
Cloudify RevertSam dsp-appsec-trivy #553: Pull request #1949 synchronize by takutosato
March 5, 2024 13:37 1m 48s ts_revertsam_lee
ts_revertsam_lee
March 5, 2024 13:37 1m 48s
Cloudify RevertSam dsp-appsec-trivy #552: Pull request #1949 synchronize by takutosato
March 5, 2024 12:07 1m 45s ts_revertsam_lee
ts_revertsam_lee
March 5, 2024 12:07 1m 45s
Cloudify RevertSam dsp-appsec-trivy #551: Pull request #1949 synchronize by takutosato
March 4, 2024 12:18 1m 50s ts_revertsam_lee
ts_revertsam_lee
March 4, 2024 12:18 1m 50s
Cloudify RevertSam dsp-appsec-trivy #550: Pull request #1949 synchronize by takutosato
March 4, 2024 12:13 1m 35s ts_revertsam_lee
ts_revertsam_lee
March 4, 2024 12:13 1m 35s
Cloudify RevertSam dsp-appsec-trivy #549: Pull request #1949 synchronize by takutosato
March 3, 2024 19:15 1m 42s ts_revertsam_lee
ts_revertsam_lee
March 3, 2024 19:15 1m 42s
CollectQualityYieldMetricsFlowSpace tool dsp-appsec-trivy #548: Pull request #1932 synchronize by dror27
March 3, 2024 18:05 1m 48s Ultimagen:CollectQualityYieldMetricsFlowSpace-dev
Ultimagen:CollectQualityYieldMetricsFlowSpace-dev
March 3, 2024 18:05 1m 48s
Cloudify RevertSam dsp-appsec-trivy #547: Pull request #1949 opened by takutosato
March 3, 2024 14:34 1m 30s ts_revertsam_lee
ts_revertsam_lee
March 3, 2024 14:34 1m 30s
Fix for order flipping in SortingCollection used for MarkDuplicates dsp-appsec-trivy #546: Pull request #1945 opened by wook-choi
February 22, 2024 10:16 1m 28s wook-choi:fix_for_tie_score_ordering
wook-choi:fix_for_tie_score_ordering
February 22, 2024 10:16 1m 28s
CollectQualityYieldMetricsFlowSpace tool dsp-appsec-trivy #545: Pull request #1932 synchronize by dror27
February 19, 2024 12:04 1m 37s Ultimagen:CollectQualityYieldMetricsFlowSpace-dev
Ultimagen:CollectQualityYieldMetricsFlowSpace-dev
February 19, 2024 12:04 1m 37s
Reject piped input (/dev/stdin) for BedToIntervalList dsp-appsec-trivy #544: Pull request #1918 synchronize by kockan
February 15, 2024 20:41 1m 39s can_bed2intervallist_stdin_check
can_bed2intervallist_stdin_check
February 15, 2024 20:41 1m 39s
Make the VCF option in CollectSamErrorMetrics optional. dsp-appsec-trivy #543: Pull request #1476 synchronize by kockan
February 15, 2024 20:08 1m 37s nh_collect_sam_error_metrics_no_vcf
nh_collect_sam_error_metrics_no_vcf
February 15, 2024 20:08 1m 37s
Update CollectSamErrorMetrics.java dsp-appsec-trivy #542: Pull request #1340 synchronize by kockan
February 15, 2024 19:54 1m 31s nh_make_vcf_optional
nh_make_vcf_optional
February 15, 2024 19:54 1m 31s
CollectQualityYieldMetricsFlowSpace tool dsp-appsec-trivy #541: Pull request #1932 synchronize by ilyasoifer
February 15, 2024 11:54 1m 33s Ultimagen:CollectQualityYieldMetricsFlowSpace-dev
Ultimagen:CollectQualityYieldMetricsFlowSpace-dev
February 15, 2024 11:54 1m 33s
MarkDuplicates strategy of flow based reads that looks only at the qualities close to the end of the read dsp-appsec-trivy #540: Pull request #1942 synchronize by ilyasoifer
February 14, 2024 20:23 1m 37s Ultimagen:ilyasoifer/md.improvements.flow
Ultimagen:ilyasoifer/md.improvements.flow
February 14, 2024 20:23 1m 37s