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make MergeVcfs (more) deterministic Build and Test #344: Pull request #2000 opened by kachulis
February 27, 2025 14:49 12m 4s ck_mergevcfs_deterministic
ck_mergevcfs_deterministic
February 27, 2025 14:49 12m 4s
feat: Small CLP for collecting the histogram of unique UMIs counts within duplicate sets Build and Test #343: Pull request #1999 opened by yfarjoun
February 15, 2025 05:02 12m 25s yfarjoun:yf_new_clp_umi_tally
yfarjoun:yf_new_clp_umi_tally
February 15, 2025 05:02 12m 25s
fix: documentation errors in HsMetrics Build and Test #342: Pull request #1998 opened by yfarjoun
February 14, 2025 15:54 12m 14s yfarjoun:yf_correct_documentation
yfarjoun:yf_correct_documentation
February 14, 2025 15:54 12m 14s
Optionally extract all fingerprint snps Build and Test #341: Pull request #1989 synchronize by yfarjoun
February 11, 2025 23:13 11m 4s yfarjoun:yf_extract_all_snps_fingerprint
yfarjoun:yf_extract_all_snps_fingerprint
February 11, 2025 23:13 11m 4s
Change test values to doubles and add epsilon in CollectHsMetricsTest Build and Test #340: Pull request #1997 synchronize by lbergelson
February 11, 2025 18:47 12m 7s lb_fix_1987
lb_fix_1987
February 11, 2025 18:47 12m 7s
Change test values to doubles and add epsilon in CollectHsMetricsTest Build and Test #339: Pull request #1997 opened by lbergelson
February 11, 2025 18:40 10m 56s lb_fix_1987
lb_fix_1987
February 11, 2025 18:40 10m 56s
CollectSamErrorMetrics now ignores reference case #1994 (#1995) Build and Test #338: Commit e38a205 pushed by lbergelson
February 11, 2025 18:16 11m 20s master
master
February 11, 2025 18:16 11m 20s
Make CollectSamErrorMetrics understand lowercased reference (and read) bases Build and Test #337: Pull request #1995 opened by yfarjoun
February 7, 2025 16:50 11m 21s yfarjoun:yf_fix_collect_sam_error_reference_case
yfarjoun:yf_fix_collect_sam_error_reference_case
February 7, 2025 16:50 11m 21s
Create a new tool, FilterReadsByFlowCellLocation for filtering out reads with specific flow cell coordinates Build and Test #336: Pull request #1992 synchronize by fleharty
February 5, 2025 20:54 11m 1s mf_FilterFlowCellEdgeReads
mf_FilterFlowCellEdgeReads
February 5, 2025 20:54 11m 1s
Updating GH actions upload-artifact v3 -> v4 (#1993) Build and Test #335: Commit 46d23b4 pushed by lbergelson
February 5, 2025 18:41 12m 13s master
master
February 5, 2025 18:41 12m 13s
Updating GH actions upload artifact v3 -> v4 Build and Test #334: Pull request #1993 opened by lbergelson
February 5, 2025 18:15 11m 38s lb_update_ghaction
lb_update_ghaction
February 5, 2025 18:15 11m 38s
Fix failures to allocate arrays with a very large Java heap size (#1986) Build and Test #333: Commit 37afd2f pushed by lbergelson
February 5, 2025 17:51 13s master
master
February 5, 2025 17:51 13s
Create a new tool, FilterReadsByFlowCellLocation for filtering out reads with specific flow cell coordinates Build and Test #332: Pull request #1992 synchronize by fleharty
February 5, 2025 15:30 13s mf_FilterFlowCellEdgeReads
mf_FilterFlowCellEdgeReads
February 5, 2025 15:30 13s
Create a new tool, FilterReadsByFlowCellLocation for filtering out reads with specific flow cell coordinates Build and Test #331: Pull request #1992 opened by fleharty
February 5, 2025 15:11 12s mf_FilterFlowCellEdgeReads
mf_FilterFlowCellEdgeReads
February 5, 2025 15:11 12s
Optionally extract all fingerprint snps Build and Test #330: Pull request #1989 opened by yfarjoun
January 28, 2025 18:38 11m 37s yfarjoun:yf_extract_all_snps_fingerprint
yfarjoun:yf_extract_all_snps_fingerprint
January 28, 2025 18:38 11m 37s
Updated outdated links to HaplotypeMap file format (#1988) Build and Test #329: Commit 5b17c47 pushed by jonn-smith
January 13, 2025 21:58 12m 43s master
master
January 13, 2025 21:58 12m 43s
Update outdated links to HaplotypeMap file format Build and Test #328: Pull request #1988 opened by lbergelson
January 13, 2025 21:28 11m 38s lb_update_haplotypemap_link
lb_update_haplotypemap_link
January 13, 2025 21:28 11m 38s
Fix failures to allocate arrays with a very large Java heap size Build and Test #327: Pull request #1986 opened by EthanNelson-Moore
December 17, 2024 23:17 11m 29s EthanNelson-Moore:large_mem_fixed
EthanNelson-Moore:large_mem_fixed
December 17, 2024 23:17 11m 29s
Update SamComparisonMetric.java and SamComparison.java to refactor in… Build and Test #326: Commit 886d5f0 pushed by lbergelson
December 17, 2024 21:58 11m 8s master
master
December 17, 2024 21:58 11m 8s
Update SamComparisonMetric.java and SamComparison.java to refactor ints to longs Build and Test #325: Pull request #1985 synchronize by gokalpcelik
December 16, 2024 13:35 11m 47s gc_SamComparisonMetric_refactor
gc_SamComparisonMetric_refactor
December 16, 2024 13:35 11m 47s
Update SamComparisonMetric.java and SamComparison.java to refactor ints to longs Build and Test #324: Pull request #1985 synchronize by gokalpcelik
December 16, 2024 13:33 12m 10s gc_SamComparisonMetric_refactor
gc_SamComparisonMetric_refactor
December 16, 2024 13:33 12m 10s
Update SamComparisonMetric.java and SamComparison.java to refactor ints to longs Build and Test #323: Pull request #1985 synchronize by gokalpcelik
December 16, 2024 13:19 12m 58s gc_SamComparisonMetric_refactor
gc_SamComparisonMetric_refactor
December 16, 2024 13:19 12m 58s
Update SamComparisonMetric.java and SamComparison.java to refactor ints to longs Build and Test #322: Pull request #1985 opened by gokalpcelik
December 16, 2024 13:13 58s gc_SamComparisonMetric_refactor
gc_SamComparisonMetric_refactor
December 16, 2024 13:13 58s
Testing https://github.com/samtools/htsjdk/pull/1709 Build and Test #321: Pull request #1984 opened by lbergelson
December 12, 2024 15:26 11m 54s lb_test_for_yossi
lb_test_for_yossi
December 12, 2024 15:26 11m 54s
Better error message for FingerprintChecker (#1982) Build and Test #320: Commit 306401a pushed by lbergelson
December 10, 2024 21:53 11m 7s master
master
December 10, 2024 21:53 11m 7s