Force hdf5 1.8 #25
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| # This starter workflow is for a CMake project running on multiple platforms. There is a different starter workflow if you just want a single platform. | |
| # See: https://github.com/actions/starter-workflows/blob/main/ci/cmake-single-platform.yml | |
| name: CMake on multiple platforms | |
| on: | |
| push: | |
| branches: [ "master" ] | |
| pull_request: | |
| branches: [ "master" ] | |
| workflow_dispatch: | |
| inputs: | |
| date: | |
| description: 'DATE: Leave blank to use todays date' | |
| required: false | |
| default: '' | |
| rel: | |
| description: 'REL: Leave blank to automatically generate (2021-03-09 = 15700)' | |
| required: false | |
| default: '' | |
| ver: | |
| description: 'VER: Leave blank to use MAJOR.MINOR.(PATCH+1) (from https://github.com/usgs-coupled/phreeqc-version/blob/main/phreeqc-version.txt)' | |
| required: false | |
| default: '' | |
| jobs: | |
| init: | |
| if: github.event.pull_request.draft == false | |
| runs-on: ubuntu-latest | |
| env: | |
| DATE: ${{ inputs.date }} | |
| REL: ${{ inputs.rel }} | |
| VER: ${{ inputs.ver }} | |
| # Map step outputs to job outputs | |
| outputs: | |
| VER: ${{ steps.vars.outputs.VER }} | |
| REL: ${{ steps.vars.outputs.REL }} | |
| DATE: ${{ steps.vars.outputs.DATE }} | |
| DATE_FULL: ${{ steps.vars.outputs.DATE_FULL }} | |
| DATE_RFC_3339: ${{ steps.vars.outputs.DATE_RFC_3339 }} | |
| steps: | |
| - name: Setup vars | |
| id: vars | |
| run: | | |
| if [ -z "${VER}" ]; then | |
| echo VER="$(curl -sS https://raw.githubusercontent.com/usgs-coupled/phreeqc-version/main/next_ver.sh | sh)" >> "${GITHUB_OUTPUT}" | |
| else | |
| echo VER="${VER}" >> "${GITHUB_OUTPUT}" | |
| fi | |
| if [ -z "${REL}" ]; then | |
| echo REL="$(curl -sS https://raw.githubusercontent.com/usgs-coupled/phreeqc-version/main/rel.py | python3)" >> "${GITHUB_OUTPUT}" | |
| else | |
| echo REL="${REL}" >> "${GITHUB_OUTPUT}" | |
| fi | |
| if [ -z "${DATE}" ]; then | |
| echo DATE="$(TZ='America/Denver' date '+%x')" >> "${GITHUB_OUTPUT}" | |
| echo DATE_RFC_3339="$(TZ='America/Denver' date --rfc-3339=date)" >> "${GITHUB_OUTPUT}" | |
| echo DATE_FULL="$(TZ='America/Denver' date)" >> "${GITHUB_OUTPUT}" | |
| else | |
| echo DATE="${DATE}" >> "${GITHUB_OUTPUT}" | |
| echo DATE_RFC_3339="$(TZ='America/Denver' date --rfc-3339=date --date=${DATE})" >> "${GITHUB_OUTPUT}" | |
| echo DATE_FULL="$(TZ='America/Denver' date --date=${DATE})" >> "${GITHUB_OUTPUT}" | |
| fi | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| # Set fail-fast to false to ensure that feedback is delivered for all matrix combinations. Consider changing this to true when your workflow is stable. | |
| fail-fast: false | |
| # Set up a matrix to run the following 3 configurations: | |
| # 1. <Windows, Release, latest MSVC compiler toolchain on the default runner image, default generator> | |
| # 2. <Linux, Release, latest GCC compiler toolchain on the default runner image, default generator> | |
| # 3. <Linux, Release, latest Clang compiler toolchain on the default runner image, default generator> | |
| # | |
| # To add more build types (Release, Debug, RelWithDebInfo, etc.) customize the build_type list. | |
| matrix: | |
| os: [ubuntu-latest, windows-latest] | |
| build_type: [Release] | |
| c_compiler: [gcc, clang, cl] | |
| toolchain: | |
| - {compiler: intel-classic, version: '2021.10'} | |
| generator: [Ninja] | |
| include: | |
| - os: windows-latest | |
| c_compiler: cl | |
| cpp_compiler: cl | |
| - os: ubuntu-latest | |
| c_compiler: gcc | |
| cpp_compiler: g++ | |
| - os: ubuntu-latest | |
| c_compiler: clang | |
| cpp_compiler: clang++ | |
| exclude: | |
| - os: windows-latest | |
| c_compiler: gcc | |
| - os: windows-latest | |
| c_compiler: clang | |
| - os: ubuntu-latest | |
| c_compiler: cl | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set reusable strings | |
| # Turn repeated input strings (such as the build output directory) into step outputs. These step outputs can be used throughout the workflow file. | |
| id: strings | |
| shell: bash | |
| run: | | |
| echo "build-output-dir=${{ github.workspace }}/build" >> "$GITHUB_OUTPUT" | |
| - uses: fortran-lang/setup-fortran@v1 | |
| id: setup-fortran | |
| with: | |
| compiler: ${{ matrix.toolchain.compiler }} | |
| version: ${{ matrix.toolchain.version }} | |
| - uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| micromamba-version: '1.5.6-0' # any version from https://github.com/mamba-org/micromamba-releases | |
| environment-file: environment.yml | |
| init-shell: >- | |
| bash | |
| powershell | |
| cache-environment: true | |
| post-cleanup: 'all' | |
| - name: Install ninja valgrind (Linux) | |
| if: ${{ runner.os == 'Linux' }} | |
| run: | | |
| sudo apt-get -y update | |
| sudo apt-get install -y ninja-build valgrind | |
| - name: Set LIBRARY_PREFIX | |
| if: ${{ runner.os == 'Windows' }} | |
| shell: bash | |
| run: echo "LIBRARY_PREFIX=$(cygpath -m $MAMBA_ROOT_PREFIX/envs/phast-dev/Library)" >> "$GITHUB_ENV" | |
| - name: Set LIBRARY_PREFIX | |
| if: ${{ runner.os != 'Windows' }} | |
| shell: bash | |
| run: echo "LIBRARY_PREFIX=$MAMBA_ROOT_PREFIX/envs/phast-dev" >> "$GITHUB_ENV" | |
| - name: Debug CONDA_PREFIX | |
| shell: bash | |
| run: find $MAMBA_ROOT_PREFIX | |
| - name: Configure CMake | |
| # Configure CMake in a 'build' subdirectory. `CMAKE_BUILD_TYPE` is only required if you are using a single-configuration generator such as make. | |
| # See https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html?highlight=cmake_build_type | |
| run: > | |
| cmake -B ${{ steps.strings.outputs.build-output-dir }} | |
| -G "${{ matrix.generator }}" | |
| -DCMAKE_CXX_COMPILER=${{ matrix.cpp_compiler }} | |
| -DCMAKE_C_COMPILER=${{ matrix.c_compiler }} | |
| -DCMAKE_Fortran_COMPILER=${{ steps.setup-fortran.outputs.fc }} | |
| -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} | |
| -DCMAKE_PREFIX_PATH="${{ env.LIBRARY_PREFIX }}" | |
| -S ${{ github.workspace }} | |
| - name: Build | |
| # Build your program with the given configuration. Note that --config is needed because the default Windows generator is a multi-config generator (Visual Studio generator). | |
| run: cmake --build ${{ steps.strings.outputs.build-output-dir }} --config ${{ matrix.build_type }} | |
| - name: Test | |
| working-directory: ${{ steps.strings.outputs.build-output-dir }} | |
| # Execute tests defined by the CMake configuration. Note that --build-config is needed because the default Windows generator is a multi-config generator (Visual Studio generator). | |
| # See https://cmake.org/cmake/help/latest/manual/ctest.1.html for more detail | |
| run: ctest --build-config ${{ matrix.build_type }} |