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81 Open 59 Closed
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Issues list

How to merge loom info into a Seurat object?
#204 opened Oct 28, 2024 by AndreaYCT
ValueError: Expected more than 1 value per channel when training, got input size torch.Size([1, 128])
#200 opened Sep 19, 2024 by zclecle2
1
Allow specification of Python virtual environment
#199 opened Sep 11, 2024 by Debilski
Unable to open HDF5 file.
#197 opened Aug 9, 2024 by cmullen2-web
Error: No feature overlap between existing object and new layer data
#196 opened Aug 5, 2024 by gizembydmr
1
Warning: Layer counts isn't present in the assay object; returning NULL
#194 opened May 23, 2024 by Noralii
The batch argument for FastMNNIntegration via IntegrateLayers is non-functional
#193 opened May 21, 2024 by erzakiev
Error in .subscript.2ary(x, i, j, drop = TRUE) : subscript out of bounds
#192 opened May 19, 2024 by FourAlarmFire
IntegrateLayers using FastMNN gives error: 'batch' must be specified if '...' has only one object
#191 opened May 10, 2024 by yesitsjess
2
Error converting Seurat object to cell_data_set, bug fix no longer exists
#189 opened Apr 30, 2024 by azurocha
1
Alra not using Scaled data
#188 opened Apr 9, 2024 by TomLuijts
Temporary Files
#187 opened Apr 4, 2024 by GischD
Warning in install.packages :package ‘SeuratWrappers’ is not available for this version of R
#186 opened Apr 2, 2024 by lmf04
1
Installing in a Conda environment
#183 opened Feb 24, 2024 by gkaf89
negative extents to matrix
#182 opened Feb 18, 2024 by parkjooyoung99
Bug report(?) of adding support to v5
#181 opened Feb 4, 2024 by JerryZhang-1222
Seurat-wrappers intsallation failure
#178 opened Jan 18, 2024 by acaulier
4
Velocyto- Seurat - invalid class “LogMap” object: Duplicate rownames not allowed
#177 opened Jan 12, 2024 by Ruba-Mahmoud
4
Learn_graph error Error: colnames(cds)!=names(cds@clusters[[reduction_method]]$partitions)
#176 opened Jan 11, 2024 by coraolpe
FastMNNIntegration not using "sketch" assay but "RNA" assay
#174 opened Dec 27, 2023 by myshu2017-03-14
Not able to convert loom to seurat
#172 opened Nov 21, 2023 by millerkaplanlab
6
Error in utils
#170 opened Nov 17, 2023 by biotech70
Please maintain the support of old version Seurat
#169 opened Nov 9, 2023 by Landau1994
13
rowData: function not defined
#167 opened Sep 19, 2023 by bhayete-empress
1
no slot of name "preprocess_aux"
#164 opened Aug 3, 2023 by Li-ZhiD
3
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